RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 CCDC13Q8IYE1 715 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 GPC2Q8N158 579 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 DHX38Q92620 1227 aaKnown RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 OSGEPQ9NPF4 335 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 TTC7AQ9ULT0 858 aaPredicted RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 A6NNZ2 444 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 TTI1O43156 1089 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 EXTL3O43909 919 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 PEX10O60683 326 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 STX2P32856 288 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 NOP14P78316 857 aaKnown RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 BASP1P80723 227 aaKnown RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 TNFAIP2Q03169 654 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 TUBB8Q3ZCM7 444 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 PPP6R3Q5H9R7 873 aaPredicted RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 ALS2CLQ60I27 953 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 CCNI2Q6ZMN8 369 aaPredicted RBP7.97□□□□□ -1.13
PHTF1-209ENST00000474926 MMS22LQ6ZRQ5 1243 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 SLC20A1Q8WUM9 679 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 OPTNQ96CV9 577 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 BTBD6Q96KE9 485 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 AGAP1Q9UPQ3 857 aa7.97□□□□□ -1.13
PHTF1-209ENST00000474926 MYH2Q9UKX2 1941 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 SPEF2Q9C093 1822 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 FRMPD4Q14CM0 1322 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 GRID2IPA4D2P6 1211 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 M0QYV0 167 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 STK10O94804 968 aaKnown RBP7.96□□□□□ -1.13
PHTF1-209ENST00000474926 ZSCAN20P17040 1043 aaPredicted RBP7.96□□□□□ -1.13
PHTF1-209ENST00000474926 COMTP21964 271 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 RFC5P40937 340 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CARSP49589 748 aaKnown RBP7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CDK17Q00537 523 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CBWD6Q4V339 395 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CBWD3Q5JTY5 395 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CBWD5Q5RIA9 395 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CCDC137Q6PK04 289 aaKnown RBP7.96□□□□□ -1.13
PHTF1-209ENST00000474926 VSIG10LQ86VR7 867 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 CCDC125Q86Z20 511 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 TRIM51Q9BSJ1 452 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.13
PHTF1-209ENST00000474926 RIPK3Q9Y572 518 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 DOT1LQ8TEK3 1739 aa7.96□□□□□ -1.13
PHTF1-209ENST00000474926 F8VZ95 297 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 IRF6O14896 467 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 PRPSAP2O60256 369 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 CELF2O95319 508 aaKnown RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 EGFRP00533 1210 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 ATF7IP2Q5U623 682 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 IER5Q5VY09 327 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 SPOPLQ6IQ16 392 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 SV2AQ7L0J3 742 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 TPCN2Q8NHX9 752 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 RUNDC3BQ96NL0 473 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 FAM118BQ9BPY3 351 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 CELF4Q9BZC1 486 aaKnown RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 TAF1DQ9H5J8 278 aaPredicted RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 C17orf75Q9HAS0 396 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 LRRC4Q9HBW1 653 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 HOMER3Q9NSC5 361 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 MAD1L1Q9Y6D9 718 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 COMMD10Q9Y6G5 202 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 SNED1Q8TER0 1413 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 GH1P01241 217 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 MMEP08473 750 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 CYP2C8P10632 490 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 MAN1A1P33908 653 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 ARHGAP25P42331 645 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 MNAT1P51948 309 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 HUNKP57058 714 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 YWHAGP61981 247 aaKnown RBP eCLIP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 LMNB2Q03252 620 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 TMEM132BQ14DG7 1078 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 DARS2Q6PI48 645 aaKnown RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 EXOC4Q96A65 974 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 TMEM117Q9H0C3 514 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 ERAP1Q9NZ08 941 aa7.96□□□□□ -1.14
PHTF1-209ENST00000474926 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.14
PHTF1-209ENST00000474926 RCCD1A6NED2 376 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 M0R2N6 131 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 TNPO2O14787 897 aaKnown RBP7.95□□□□□ -1.14
PHTF1-209ENST00000474926 P4HA2O15460 535 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 RAD51CO43502 376 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 CALB1P05937 261 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 NR1D1P20393 614 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 GBP1P32455 592 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 KCNJ1P48048 391 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 PDCLQ13371 301 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 MEA1Q16626 185 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 PPP1R2P3Q6NXS1 205 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 CCDC60Q8IWA6 550 aaPredicted RBP7.95□□□□□ -1.14
PHTF1-209ENST00000474926 BBOF1Q8ND07 529 aa7.95□□□□□ -1.14
PHTF1-209ENST00000474926 TRAPPC12Q8WVT3 735 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms