RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 CSRNP2Q9H175 543 aa13.83□□□□□ -0.2
TRIM13-207ENST00000474805 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
TRIM13-207ENST00000474805 NXF3Q9H4D5 531 aaKnown RBP13.83□□□□□ -0.2
TRIM13-207ENST00000474805 HCFC1R1Q9NWW0 138 aa13.83□□□□□ -0.2
TRIM13-207ENST00000474805 GIT1Q9Y2X7 761 aa13.83□□□□□ -0.2
TRIM13-207ENST00000474805 USP24Q9UPU5 2620 aa13.83□□□□□ -0.2
TRIM13-207ENST00000474805 ZFHX4Q86UP3 3567 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 CHD6Q8TD26 2715 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 NCAM2O15394 837 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 RFC5P40937 340 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 FZD5Q13467 585 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 EMC2Q15006 297 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 LNX1Q8TBB1 728 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 ING5Q8WYH8 240 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 NELL2Q99435 816 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 PLA2G2FQ9BZM2 168 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 GMEB2Q9UKD1 530 aa13.82□□□□□ -0.2
TRIM13-207ENST00000474805 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.82□□□□□ -0.2
TRIM13-207ENST00000474805 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 ZBTB39O15060 712 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 ADAM12O43184 909 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 SLC37A4O43826 429 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 DKC1O60832 514 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 HMGB1P09429 215 aaKnown RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 RPS9P46781 194 aaKnown RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PTENP60484 403 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 MTAPQ13126 283 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 KRT32Q14532 448 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PSMD5Q16401 504 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 ZNF852Q6ZMS4 543 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PRMT8Q9NR22 394 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 HEBP1Q9NRV9 189 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 DNMT3BQ9UBC3 853 aaKnown RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PARP2Q9UGN5 583 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
TRIM13-207ENST00000474805 VAV3Q9UKW4 847 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 PCDHA4Q9UN74 947 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 NID2Q14112 1375 aa13.81□□□□□ -0.2
TRIM13-207ENST00000474805 SHISA7A6NL88 538 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 XYLBO75191 536 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 NPTXRO95502 500 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 P4HBP07237 508 aaKnown RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 IFNAR1P17181 557 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 ARF4P18085 180 aaPredicted RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 GRIK3Q13003 919 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 PPP2R5CQ13362 524 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 AMHR2Q16671 573 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 NPAS3Q8IXF0 933 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 HACE1Q8IYU2 909 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 MTRQ99707 1265 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 NCOA5Q9HCD5 579 aaKnown RBP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 SF3B1O75533 1304 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM13-207ENST00000474805 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
TRIM13-207ENST00000474805 F5P12259 2224 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.79□□□□□ -0.2
TRIM13-207ENST00000474805 CASTOR2A6NHX0 329 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 M0R2N6 131 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 B4GALT5O43286 388 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 KIF4AO95239 1232 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 HOXA9P31269 272 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 INF2Q27J81 1249 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
TRIM13-207ENST00000474805 POTEHQ6S545 545 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 C4orf19Q8IY42 314 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 LXNQ9BS40 222 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 FAM126AQ9BYI3 521 aaPredicted RBP13.79□□□□□ -0.2
TRIM13-207ENST00000474805 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 RAB23Q9ULC3 237 aa13.79□□□□□ -0.2
TRIM13-207ENST00000474805 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
TRIM13-207ENST00000474805 MRPS17Q9Y2R5 130 aaKnown RBP13.79□□□□□ -0.2
TRIM13-207ENST00000474805 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms