RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DGKIO75912 1065 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 AKAP3O75969 853 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 NR3C1P04150 777 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 AKAP5P24588 427 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 ABCD1P33897 745 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 HTRA4P83105 476 aaPredicted RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 DCAF4L1Q3SXM0 396 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 ZNF568Q3ZCX4 644 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 SPRED2Q7Z698 418 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 CBWD2Q8IUF1 395 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 NELFBQ8WX92 580 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 EEF2KMTQ96G04 330 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 CASD1Q96PB1 797 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
CASC3-204ENST00000474190 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
CASC3-204ENST00000474190 TTC3P53804 2025 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 GOLGA8IPA6NC78 632 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 GOLGA8JA6NMD2 632 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 RECQL4O94761 1208 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 GJB5O95377 273 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 EOMESO95936 686 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
CASC3-204ENST00000474190 ACOT2P49753 483 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 STX17P56962 302 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 MYBPC2Q14324 1141 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 ZBTB6Q15916 424 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 KLHL10Q6JEL2 608 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
CASC3-204ENST00000474190 SNX27Q96L92 541 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 RWDD2AQ9UIY3 292 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 AGO2Q9UKV8 859 aaKnown RBP11.31□□□□□ -0.6
CASC3-204ENST00000474190 EXOC7Q9UPT5 735 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
CASC3-204ENST00000474190 ARL5CA6NH57 179 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 EXTL3O43909 919 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 EFCAB14O75071 495 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CLTAP09496 248 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CXCL8P10145 99 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 HARSP12081 509 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 MYOGP15173 224 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 RAB27AP51159 221 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 ZNF445P59923 1031 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 OSTNP61366 133 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CLDN10P78369 228 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 PAK1Q13153 545 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 IQCB1Q15051 598 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 LRIT3Q3SXY7 679 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 SLFN12LQ6IEE8 588 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CD300LGQ6UXG3 332 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 BICD1Q96G01 975 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 GAD1Q99259 594 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
CASC3-204ENST00000474190 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 YBX2Q9Y2T7 364 aaKnown RBP11.3□□□□□ -0.6
CASC3-204ENST00000474190 MUC3AQ02505 3323 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 SMIM28A0A1B0GU29 152 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 LACTBL1A8MY62 500 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 PSMA7O14818 248 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 DDHD2O94830 711 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 KCNE1P15382 129 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 ATP2A2P16615 1042 aaKnown RBP11.29□□□□□ -0.6
CASC3-204ENST00000474190 NR2F2P24468 414 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 PBX2P40425 430 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 MLH1P40692 756 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 CYP2J2P51589 502 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 RABGGTBP53611 331 aa11.29□□□□□ -0.6
CASC3-204ENST00000474190 DLG4P78352 724 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms