RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLDN3O15551 220 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 TOM1L1O75674 476 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 GTF2F1P35269 517 aaKnown RBP eCLIP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 AMPD3Q01432 767 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 SHC4Q6S5L8 630 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 ACAP3Q96P50 834 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 CUEDC2Q9H467 287 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 RCOR1Q9UKL0 485 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 TBX20Q9UMR3 447 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 ZDHHC9Q9Y397 364 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 FSD2A1L4K1 749 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 FSCN2O14926 492 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 HNRNPDLO14979 420 aaKnown RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 GAP43P17677 238 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 GRM5P41594 1212 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 NDUFV1P49821 464 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 KCNQ1P51787 676 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 ZPBP2Q6X784 338 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 SFR1Q86XK3 245 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 ZBTB45Q96K62 511 aaPredicted RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 MRPL44Q9H9J2 332 aaKnown RBP15.57■□□□□ 0.08
VAMP4-203ENST00000474047 PTPRHQ9HD43 1115 aa15.57■□□□□ 0.08
VAMP4-203ENST00000474047 H3BQ06 376 aaPredicted RBP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 B4GALT3O60512 393 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 SRGAP2BP0DMP2 458 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 DSC1Q08554 894 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 NOLC1Q14978 699 aaKnown RBP eCLIP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 HERC4Q5GLZ8 1057 aaPredicted RBP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 AXDND1Q5T1B0 1012 aaPredicted RBP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 EFHBQ8N7U6 833 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 GSTCDQ8NEC7 633 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 STAMQ92783 540 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 CDCA3Q99618 268 aaPredicted RBP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 PYM1Q9BRP8 204 aaKnown RBP15.56■□□□□ 0.08
VAMP4-203ENST00000474047 PANK4Q9NVE7 773 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 SEL1LQ9UBV2 794 aa15.56■□□□□ 0.08
VAMP4-203ENST00000474047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.55■□□□□ 0.08
VAMP4-203ENST00000474047 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
VAMP4-203ENST00000474047 TADA2AO75478 443 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 ADAM15Q13444 863 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 TUSC3Q13454 348 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 KIAA1841Q6NSI8 718 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 CCDC65Q8IXS2 484 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 CEP120Q8N960 986 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 MRPL43Q8N983 215 aaKnown RBP15.55■□□□□ 0.08
VAMP4-203ENST00000474047 BCL7CQ8WUZ0 217 aaPredicted RBP15.55■□□□□ 0.08
VAMP4-203ENST00000474047 SCAND2PQ9GZW5 306 aaPredicted RBP15.55■□□□□ 0.08
VAMP4-203ENST00000474047 TBC1D7Q9P0N9 293 aa15.55■□□□□ 0.08
VAMP4-203ENST00000474047 CASTOR2A6NHX0 329 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 HIDE1A8MVS5 230 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 PTGESO14684 152 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 LINC01565O15544 149 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 CTSAP10619 480 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 PROZP22891 400 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 NUCB2P80303 420 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 PUS10Q3MIT2 529 aaKnown RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 LEXMQ3ZCV2 418 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ZC2HC1CQ53FD0 456 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 GLRA4Q5JXX5 417 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 RESP18Q5W5W9 173 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 LEO1Q8WVC0 666 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 AUTS2Q8WXX7 1259 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 RABGGTAQ92696 567 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 DNAJC19Q96DA6 116 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ZBP1Q9H171 429 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 TNMDQ9H2S6 317 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 FAM50BQ9Y247 325 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ATG2AQ2TAZ0 1938 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 C2orf71A6NGG8 1288 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 GCNT3O95395 438 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 URODP06132 367 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 GTF2BQ00403 316 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 MCL1Q07820 350 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 HSP90AA2PQ14568 343 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 CLUL1Q15846 466 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 KYAT1Q16773 422 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 DUSP6Q16828 381 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 LLGL2Q6P1M3 1020 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ZNF720Q7Z2F6 126 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 ADAMTS19Q8TE59 1207 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 MRPL17Q9NRX2 175 aaKnown RBP15.54■□□□□ 0.08
VAMP4-203ENST00000474047 KCNH3Q9ULD8 1083 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 EXOC7Q9UPT5 735 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 SSX2IPQ9Y2D8 614 aa15.54■□□□□ 0.08
VAMP4-203ENST00000474047 C2CD2LO14523 706 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 BMP1P13497 986 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 ASIC1P78348 528 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 COL19A1Q14993 1142 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 E2F4Q16254 413 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 CTC1Q2NKJ3 1217 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 SEZ6Q53EL9 994 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 SLFN12LQ6IEE8 588 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 PTCRAQ6ISU1 281 aaPredicted RBP15.53■□□□□ 0.08
VAMP4-203ENST00000474047 STXBP4Q6ZWJ1 553 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms