RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 IKZF4Q9H2S9 585 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 SEMA6BQ9H3T3 888 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 NOC2LQ9Y3T9 749 aaKnown RBP8.32□□□□□ -1.08
CCDC93-207ENST00000474006 PCDHGA11Q9Y5H2 935 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 TRPV2Q9Y5S1 764 aa8.32□□□□□ -1.08
CCDC93-207ENST00000474006 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 TGFB1I1O43294 461 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 CLTBP09497 229 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 SELPP16109 830 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 CCNE1P24864 410 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 ABCD1P33897 745 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 PPP1R2P41236 205 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 PMS1P54277 932 aaKnown RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 STX17P56962 302 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 RBL2Q08999 1139 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 ANKRD40Q6AI12 368 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 CENPPQ6IPU0 288 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 LIAT1Q6ZQX7 453 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 C11orf57Q6ZUT1 292 aaPredicted RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 MAP4K3Q8IVH8 894 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 TMEM40Q8WWA1 233 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 NELFBQ8WX92 580 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 P2RX5Q93086 422 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 HVCN1Q96D96 273 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 MED15Q96RN5 788 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 ACO2Q99798 780 aaKnown RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 TARS2Q9BW92 718 aaKnown RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 NAT10Q9H0A0 1025 aaKnown RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 GBP3Q9H0R5 595 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 KCTD10Q9H3F6 313 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 HIPK3Q9H422 1215 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 TSPY26PQ9H489 355 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 TMEM206Q9H813 350 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 PRMT7Q9NVM4 692 aaPredicted RBP8.31□□□□□ -1.08
CCDC93-207ENST00000474006 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 RWDD2AQ9UIY3 292 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 EXOC7Q9UPT5 735 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 BRCA2P51587 3418 aa8.31□□□□□ -1.08
CCDC93-207ENST00000474006 PHLPP2Q6ZVD8 1323 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 DOCK5Q9H7D0 1870 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 TRIM43BA6NCK2 446 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PDXKO00764 312 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PSMA7O14818 248 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 GPR182O15218 404 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 B4GALT5O43286 388 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 RPS6KA5O75582 802 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 EDN1P05305 212 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PRKCBP05771 671 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 GHRP10912 638 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 ADSSP30520 456 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 HOXA11P31270 313 aaPredicted RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 CYP2C18P33260 490 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 ZNF165P49910 485 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 CCL23P55773 120 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 NCBP1Q09161 790 aaKnown RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 LPIN1Q14693 890 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 GPNMBQ14956 572 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 FAM187BQ17R55 369 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 FBXO47Q5MNV8 452 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 CATSPER4Q7RTX7 472 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 GAS2L3Q86XJ1 694 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 ENOX1Q8TC92 643 aaKnown RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 BICD1Q96G01 975 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 ZBTB45Q96K62 511 aaPredicted RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 MRPL4Q9BYD3 311 aaKnown RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 AGO3Q9H9G7 860 aaKnown RBP8.3□□□□□ -1.08
CCDC93-207ENST00000474006 TBX21Q9UL17 535 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 PADI3Q9ULW8 664 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 ST3GAL5Q9UNP4 418 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 SQORQ9Y6N5 450 aa8.3□□□□□ -1.08
CCDC93-207ENST00000474006 UBE4BO95155 1302 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 UMODL1Q5DID0 1318 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 BICDL2A1A5D9 508 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TRIM49BA6NDI0 452 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TISP43B9A030 160 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 KIAA0355O15063 1070 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CLIC2O15247 247 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SIAH2O43255 324 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CALUO43852 315 aaPredicted RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TSPAN1O60635 241 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 NBNO60934 754 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CAVIN2O95810 425 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TIMP1P01033 207 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PIGRP01833 764 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ARF4P18085 180 aaPredicted RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ITGB8P26012 769 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 AXLP30530 894 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CD52P31358 61 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms