RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HIDE1A8MVS5 230 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 H0YCG3 227 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 MEFVO15553 781 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-210ENST00000473829 TOM1L1O75674 476 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 MCF2P10911 925 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 OR1G1P47890 313 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 NRIP1P48552 1158 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 KCNQ1P51787 676 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 OSTNP61366 133 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 NAB2Q15742 525 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 RBM23Q86U06 439 aaKnown RBP20.75■□□□□ 0.91
PTCD3-210ENST00000473829 RABGGTAQ92696 567 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 PABPC5Q96DU9 382 aaKnown RBP20.75■□□□□ 0.91
PTCD3-210ENST00000473829 SPATA32Q96LK8 384 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 ASB2Q96Q27 587 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 FGFBP2Q9BYJ0 223 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 IGFLR1Q9H665 355 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 ENTPD7Q9NQZ7 604 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 KBTBD4Q9NVX7 518 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 FAN1Q9Y2M0 1017 aa20.75■□□□□ 0.91
PTCD3-210ENST00000473829 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
PTCD3-210ENST00000473829 FRMD3A2A2Y4 597 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 PER2O15055 1255 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 POLR2DO15514 142 aaKnown RBP20.74■□□□□ 0.91
PTCD3-210ENST00000473829 PIGRP01833 764 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 ALDH2P05091 517 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 KCNA5P22460 613 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 LTBRP36941 435 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 MRPS5P82675 430 aaKnown RBP20.74■□□□□ 0.91
PTCD3-210ENST00000473829 GTF2BQ00403 316 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 NOLC1Q14978 699 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTCD3-210ENST00000473829 CTC1Q2NKJ3 1217 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 SEZ6Q53EL9 994 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 GLRA4Q5JXX5 417 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 APBB1IPQ7Z5R6 666 aaPredicted RBP20.74■□□□□ 0.91
PTCD3-210ENST00000473829 DDX53Q86TM3 631 aaKnown RBP20.74■□□□□ 0.91
PTCD3-210ENST00000473829 MAP4K3Q8IVH8 894 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 VPS52Q8N1B4 723 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 AUTS2Q8WXX7 1259 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 PAAF1Q9BRP4 392 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 ZBP1Q9H171 429 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 TNMDQ9H2S6 317 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 IKZF4Q9H2S9 585 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 CLDND1Q9NY35 253 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 TBC1D7Q9P0N9 293 aa20.74■□□□□ 0.91
PTCD3-210ENST00000473829 CARNS1A5YM72 827 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 TBX10O75333 385 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 PPP1R37O75864 691 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 IDEP14735 1019 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 CASP5P51878 434 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 RBM10P98175 930 aaKnown RBP20.73■□□□□ 0.91
PTCD3-210ENST00000473829 DLX2Q07687 328 aaPredicted RBP20.73■□□□□ 0.91
PTCD3-210ENST00000473829 MCL1Q07820 350 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 PDE12Q6L8Q7 609 aaKnown RBP20.73■□□□□ 0.91
PTCD3-210ENST00000473829 SLC39A4Q6P5W5 647 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 TMC7Q7Z402 723 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 IQUBQ8NA54 791 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 BICD1Q96G01 975 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 CCDC94Q9BW85 323 aaPredicted RBP20.73■□□□□ 0.91
PTCD3-210ENST00000473829 CUEDC2Q9H467 287 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 ST6GALNAC4Q9H4F1 302 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 FAM13BQ9NYF5 915 aa20.73■□□□□ 0.91
PTCD3-210ENST00000473829 TCF20Q9UGU0 1960 aaKnown RBP20.72■□□□□ 0.91
PTCD3-210ENST00000473829 CASTOR2A6NHX0 329 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 TISP43B9A030 160 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 H3BQ06 376 aaPredicted RBP20.72■□□□□ 0.91
PTCD3-210ENST00000473829 HNRNPDLO14979 420 aaKnown RBP20.72■□□□□ 0.91
PTCD3-210ENST00000473829 GLP2RO95838 553 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 EFEMP2O95967 443 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 GAP43P17677 238 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 LIG4P49917 911 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 TUSC3Q13454 348 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 TJAP1Q5JTD0 557 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 EP400NLQ6ZTU2 488 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 ZNF720Q7Z2F6 126 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 VN1R2Q8NFZ6 395 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 SNX27Q96L92 541 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 STRA6Q9BX79 667 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 TRIM9Q9C026 710 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 TLE6Q9H808 572 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 GDPD2Q9HCC8 539 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 NGRNQ9NPE2 291 aaKnown RBP20.72■□□□□ 0.91
PTCD3-210ENST00000473829 PANK4Q9NVE7 773 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 SEL1LQ9UBV2 794 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 ATP6V1DQ9Y5K8 247 aa20.72■□□□□ 0.91
PTCD3-210ENST00000473829 C2orf71A6NGG8 1288 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 ANKRD63C9JTQ0 380 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 CLDN3O15551 220 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 THP07101 528 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 CTSAP10619 480 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 PFKFB1P16118 471 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 SCP2P22307 547 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 CASP1P29466 404 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 KCNA1Q09470 495 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 ADAM15Q13444 863 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 SMC1AQ14683 1233 aaKnown RBP20.71■□□□□ 0.91
PTCD3-210ENST00000473829 DUSP6Q16828 381 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 XKR4Q5GH76 650 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 ZBTB41Q5SVQ8 909 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms