RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ASAP2O43150 1006 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 VAMP4O75379 141 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CELA2BP08218 269 aaPredicted RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PDHA1P08559 390 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 AMPD1P23109 780 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PEX5P50542 639 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HPCAP84074 193 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ADRM1Q16186 407 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CNPY1Q3B7I2 92 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 DAB2IPQ5VWQ8 1189 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 FOXB2Q5VYV0 432 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 KCTD16Q68DU8 428 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 LRIG3Q6UXM1 1119 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RAD9BQ6WBX8 426 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF572Q7Z3I7 529 aaPredicted RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 TMTC1Q8IUR5 882 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 LILRB2Q8N423 598 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SCAIQ8N9R8 606 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SH3TC2Q8TF17 1288 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 NOC3LQ8WTT2 800 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RILPL2Q969X0 211 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 FAM136AQ96C01 138 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 OLFM3Q96PB7 478 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 UIMC1Q96RL1 719 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC39A3Q9BRY0 314 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 INTS13Q9NVM9 706 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CHMP2BQ9UQN3 213 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 LUC7L2Q9Y383 392 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 FADS3Q9Y5Q0 445 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CSADQ9Y600 493 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SBNO1A3KN83 1393 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ZNF233A6NK53 670 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CYTH3O43739 400 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ORC4O43929 436 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 NME1P15531 152 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 DRD4P21917 467 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CALB2P22676 271 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RXRBP28702 533 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 GRK4P32298 578 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 COPB2P35606 906 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 MSH2P43246 934 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HNRNPMP52272 730 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CSE1LP55060 971 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 ADKP55263 362 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 TUBA4AP68366 448 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 DMPKQ09013 629 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PDCD4Q53EL6 469 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CDCP2Q5VXM1 449 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SLC2A7Q6PXP3 512 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 GSPT2Q8IYD1 628 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 PPP1R14CQ8TAE6 165 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 DNAJC9Q8WXX5 260 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CENPTQ96BT3 561 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CTAGE1Q96RT6 745 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 SIKE1Q9BRV8 207 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CENPKQ9BS16 269 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 C19orf44Q9H6X5 657 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 CNNM2Q9H8M5 875 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RNPEPL1Q9HAU8 725 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 IL1RAPL1Q9NZN1 696 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 HIF3AQ9Y2N7 669 aa5.53□□□□□ -1.52
TMEM39A-206ENST00000473684 RIMS2Q9UQ26 1411 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 COL18A1P39060 1754 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 NHSQ6T4R5 1651 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 ANO9A1A5B4 782 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 PRAMEF27A3QJZ7 478 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 H3BQV1 296 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 ALDH1L1O75891 902 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 CCDC159P0C7I6 412 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 HSPA8P11142 646 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 PSMA5P28066 241 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 VAV2P52735 878 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 ERVK-24P63145 666 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 TUBA1BP68363 451 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 PPIDQ08752 370 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 MTF1Q14872 753 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 KPNB1Q14974 876 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 EXOSC6Q5RKV6 272 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 TCERG1LQ5VWI1 586 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 OLFM4Q6UX06 510 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 CCDC129Q6ZRS4 1044 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 TUBA1AQ71U36 451 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 C11orf74Q86VG3 221 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 PPFIBP1Q86W92 1011 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 CNGA4Q8IV77 575 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 SCUBE1Q8IWY4 988 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 SLC7A5P1Q8MH63 180 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 RNF10Q8N5U6 811 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 CAGE1Q8TC20 777 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 UBASH3BQ8TF42 649 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 GIMAP1Q8WWP7 306 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 RAB3IPQ96QF0 476 aaPredicted RBP5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 CCT7Q99832 543 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 KRT23Q9C075 422 aa5.52□□□□□ -1.53
TMEM39A-206ENST00000473684 WNT10AQ9GZT5 417 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms