RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 FAM107BQ9H098 131 aa16.05■□□□□ 0.16
LMNA-213ENST00000473598 IFT122Q9HBG6 1241 aa16.05■□□□□ 0.16
LMNA-213ENST00000473598 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
LMNA-213ENST00000473598 STYXL1Q9Y6J8 313 aa16.05■□□□□ 0.16
LMNA-213ENST00000473598 C17orf102A2RUQ5 167 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 AKR1B15C9JRZ8 316 aaPredicted RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 ASGR1P07306 291 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 GNAT1P11488 350 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 PHKA2P46019 1235 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 TARS2Q9BW92 718 aaKnown RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 FZD8Q9H461 694 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 A0A087WZ62 844 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 EFCAB8A8MWE9 144 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 TREHO43280 583 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 PRKCBP05771 671 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 CYP2C9P11712 490 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 USP8P40818 1118 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 GPC3P51654 580 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 MBTD1Q05BQ5 628 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 RBL2Q08999 1139 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 SLFN12LQ6IEE8 588 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 RNF180Q86T96 592 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
LMNA-213ENST00000473598 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
LMNA-213ENST00000473598 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 DCAF17Q5H9S7 520 aaPredicted RBP16.03■□□□□ 0.16
LMNA-213ENST00000473598 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
LMNA-213ENST00000473598 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
LMNA-213ENST00000473598 MINDY3Q9H8M7 445 aa16.03■□□□□ 0.16
LMNA-213ENST00000473598 ACKR2O00590 384 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 KIAA0391O15091 583 aaKnown RBP16.02■□□□□ 0.16
LMNA-213ENST00000473598 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
LMNA-213ENST00000473598 NLRP11P59045 1033 aaKnown RBP16.02■□□□□ 0.16
LMNA-213ENST00000473598 ZNF200P98182 395 aaPredicted RBP16.02■□□□□ 0.16
LMNA-213ENST00000473598 BFSP1Q12934 665 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 TCERG1LQ5VWI1 586 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 RUFY4Q6ZNE9 571 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 GPD1LQ8N335 351 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 NLRP7Q8WX94 980 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 PPP1R16BQ96T49 567 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 FAM49AQ9H0Q0 323 aaPredicted RBP16.02■□□□□ 0.16
LMNA-213ENST00000473598 GTF2IRD1Q9UHL9 959 aa16.02■□□□□ 0.16
LMNA-213ENST00000473598 A0A087WUV0 522 aaPredicted RBP16.02■□□□□ 0.15
LMNA-213ENST00000473598 GOLGA8IPA6NC78 632 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 GOLGA8JA6NMD2 632 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 TADA3O75528 432 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 SASH3O75995 380 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 GYPCP04921 128 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 KRT13P13646 458 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.15
LMNA-213ENST00000473598 FAM187BQ17R55 369 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.15
LMNA-213ENST00000473598 ACO2Q99798 780 aaKnown RBP16.02■□□□□ 0.15
LMNA-213ENST00000473598 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.15
LMNA-213ENST00000473598 PRMT7Q9NVM4 692 aaPredicted RBP16.02■□□□□ 0.15
LMNA-213ENST00000473598 ZSCAN12O43309 604 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 MFAP3LO75121 409 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 TOM1L1O75674 476 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 IQCF3P0C7M6 154 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 MCCD1P59942 119 aaPredicted RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 TRIM14Q14142 442 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 CBWD2Q8IUF1 395 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 DNAJB3Q8WWF6 145 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 PAWRQ96IZ0 340 aaKnown RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 ADAMTS10Q9H324 1103 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 KIAA1586Q9HCI6 787 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 ANKFY1Q9P2R3 1169 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 AGO2Q9UKV8 859 aaKnown RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 PPP2R2CQ9Y2T4 447 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 A0A0B4J269 797 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 EXTL3O43909 919 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 GPR32O75388 356 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 LDHAP00338 332 aaKnown RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 ADRB2P07550 413 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 CASP14P31944 242 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 KLK7P49862 253 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 KCNMA1Q12791 1236 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 TSHZ1Q6ZSZ6 1077 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 SRGAP1Q7Z6B7 1085 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 TADA2BQ86TJ2 420 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms