RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 KANK3Q6NY19 840 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 PADI6Q6TGC4 694 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 KIFAP3Q92845 792 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 RTP3Q9BQQ7 232 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 RAB34Q9BZG1 259 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 GPR62Q9BZJ7 368 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 PRKD2Q9BZL6 878 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 CCDC113Q9H0I3 377 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 MFSD1Q9H3U5 465 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 KCNG1Q9UIX4 513 aa14.96□□□□□ -0.01
CHD3-209ENST00000473376 CLUHO75153 1309 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 TMEM189-UBE2V1I3L0A0 370 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 C2CD2LO14523 706 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 TGM5O43548 720 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 PDGFBP01127 241 aaPredicted RBP14.95□□□□□ -0.02
CHD3-209ENST00000473376 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHD3-209ENST00000473376 AOC1P19801 751 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 NBL1P41271 181 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 ST3GAL1Q11201 340 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 NOSTRINQ8IVI9 506 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 TMEM105Q8N8V8 129 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 SMG7Q92540 1137 aaKnown RBP14.95□□□□□ -0.02
CHD3-209ENST00000473376 ATOH1Q92858 354 aaPredicted RBP14.95□□□□□ -0.02
CHD3-209ENST00000473376 ZNF707Q96C28 371 aaPredicted RBP14.95□□□□□ -0.02
CHD3-209ENST00000473376 IFT74Q96LB3 600 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 PDZD7Q9H5P4 517 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 C17orf75Q9HAS0 396 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 PARP2Q9UGN5 583 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 MYO10Q9HD67 2058 aa14.95□□□□□ -0.02
CHD3-209ENST00000473376 ARHGEF35A5YM69 484 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 ZMYND10O75800 440 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 U2AF2P26368 475 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHD3-209ENST00000473376 UVSSAQ2YD98 709 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 UROC1Q96N76 676 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 APOL6Q9BWW8 343 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 GPRC5CQ9NQ84 441 aa14.94□□□□□ -0.02
CHD3-209ENST00000473376 NOL7Q9UMY1 257 aaKnown RBP14.94□□□□□ -0.02
CHD3-209ENST00000473376 ANHXE9PGG2 379 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 PTGESO14684 152 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 PRKCBP05771 671 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 SRFP11831 508 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 LAMP2P13473 410 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 NAB2Q15742 525 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 TTC38Q5R3I4 469 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 C4orf32Q8N8J7 132 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 IGSF22Q8N9C0 903 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
CHD3-209ENST00000473376 PHOX2BQ99453 314 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 TIPINQ9BVW5 301 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 TNFSF13BQ9Y275 285 aa14.93□□□□□ -0.02
CHD3-209ENST00000473376 TRAPPC3O43617 180 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 N4BP1O75113 896 aaKnown RBP14.92□□□□□ -0.02
CHD3-209ENST00000473376 RECQL4O94761 1208 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 NPR3P17342 541 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 PRPHP41219 470 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 ZNF174Q15697 407 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 PHLDB3Q6NSJ2 640 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 DCLRE1AQ6PJP8 1040 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
CHD3-209ENST00000473376 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 LNX1Q8TBB1 728 aaPredicted RBP14.92□□□□□ -0.02
CHD3-209ENST00000473376 CLSTN3Q9BQT9 956 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 SEMA4AQ9H3S1 761 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 TMEM134Q9H6X4 195 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 PIDD1Q9HB75 910 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 SLC2A4RGQ9NR83 387 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 KLK14Q9P0G3 267 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 LRWD1Q9UFC0 647 aa14.92□□□□□ -0.02
CHD3-209ENST00000473376 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
CHD3-209ENST00000473376 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.92□□□□□ -0.02
CHD3-209ENST00000473376 F8W810 466 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 H0Y858 1186 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 K7ERI5 159 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 GFRA3O60609 400 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 DTNBO60941 627 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 RFPL2O75678 378 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 GBP2P32456 591 aaPredicted RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 RAB33AQ14088 237 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 XKR4Q5GH76 650 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 RTP2Q5QGT7 225 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 FAM171A1Q5VUB5 890 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 CWF19L1Q69YN2 538 aaKnown RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 MAEAQ7L5Y9 396 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 PALB2Q86YC2 1186 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 CCDC105Q8IYK2 499 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 FAM184AQ8NB25 1140 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 DDX27Q96GQ7 796 aaKnown RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 BORCS6Q96GS4 357 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 SMOC2Q9H3U7 446 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 TOPORSQ9NS56 1045 aaPredicted RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 SLC38A7Q9NVC3 462 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms