RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 K7ENM7 598 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 MBTPS2O43462 519 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 DCXO43602 365 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 TADA2AO75478 443 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 PLS3P13797 630 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 KLRC2P26717 231 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 MRE11P49959 708 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 SLC12A3P55017 1021 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 GRIN1Q05586 938 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 MCM6Q14566 821 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 EEF1DP3Q658K8 133 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 CES5AQ6NT32 575 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 ELMSAN1Q6PJG2 1045 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 COLGALT2Q8IYK4 626 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
CPNE1-222ENST00000473373 KRI1Q8N9T8 703 aaKnown RBP12.65□□□□□ -0.38
CPNE1-222ENST00000473373 RAD54LQ92698 747 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 CCDC113Q9H0I3 377 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 ZBP1Q9H171 429 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 TOPORSQ9NS56 1045 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-222ENST00000473373 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 CTSAP10619 480 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
CPNE1-222ENST00000473373 LTBRP36941 435 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 STAT6P42226 847 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 LIG4P49917 911 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
CPNE1-222ENST00000473373 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 PPFIBP1Q86W92 1011 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 REEP2Q9BRK0 252 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 TARS2Q9BW92 718 aaKnown RBP12.64□□□□□ -0.39
CPNE1-222ENST00000473373 PARVGQ9HBI0 331 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 MIOSQ9NXC5 875 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-222ENST00000473373 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
CPNE1-222ENST00000473373 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
CPNE1-222ENST00000473373 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 B4GALT3O60512 393 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 GLP2RO95838 553 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 SOD2P04179 222 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 GLUD2P49448 558 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 NHLH1Q02575 133 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ZP2Q05996 745 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 TUSC3Q13454 348 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ANKRD54Q6NXT1 300 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 MPZL3Q6UWV2 235 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 SV2BQ7L1I2 683 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 GLYCTKQ8IVS8 523 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 DAW1Q8N136 415 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 BCL7CQ8WUZ0 217 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-222ENST00000473373 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ACAP3Q96P50 834 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
CPNE1-222ENST00000473373 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ARHGAP28Q9P2N2 729 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
CPNE1-222ENST00000473373 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 PRKAG3Q9UGI9 489 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ADAM28Q9UKQ2 775 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-222ENST00000473373 HCFC2Q9Y5Z7 792 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
CPNE1-222ENST00000473373 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 SPTLC2O15270 562 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CLDN3O15551 220 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 EDN1P05305 212 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 ADH1AP07327 375 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 HOXB8P17481 243 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 COASYQ13057 564 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 MAPK7Q13164 816 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 HSP90AA2PQ14568 343 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 COL19A1Q14993 1142 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 PTPAQ15257 358 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 SMAD2Q15796 467 aaKnown RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 RARS2Q5T160 578 aaKnown RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 FUT10Q6P4F1 479 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms