RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ZNF687Q8N1G0 1237 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 PATJQ8NI35 1801 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 HDAC7Q8WUI4 952 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 BSNDQ8WZ55 320 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 FGF13Q92913 245 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 TNFRSF25Q93038 417 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 PIDD1Q9HB75 910 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 PARD6AQ9NPB6 346 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 ZDHHC7Q9NXF8 308 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 CACNA1IQ9P0X4 2223 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 DNMT3BQ9UBC3 853 aaKnown RBP10.71□□□□□ -0.69
MCF2L-223ENST00000473345 MYH15Q9Y2K3 1946 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 GIT1Q9Y2X7 761 aa10.71□□□□□ -0.69
MCF2L-223ENST00000473345 ZFHX4Q86UP3 3567 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 INO80B-WBP1J3KQ70 363 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 DEXIO95424 95 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 SCRN1Q12765 414 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 NR5A1Q13285 461 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 SLC44A4Q53GD3 710 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 EEF1DP3Q658K8 133 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 PPP4R3AQ6IN85 833 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 NOTUMQ6P988 496 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 RUFY3Q7L099 469 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 KRT25Q7Z3Z0 450 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 PIGOQ8TEQ8 1089 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 ING5Q8WYH8 240 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 RUBCNQ92622 972 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 STAMQ92783 540 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 NELL1Q92832 810 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 NXPE3Q969Y0 559 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 MTRQ99707 1265 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 HSD17B14Q9BPX1 270 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 EIF2AK1Q9BQI3 630 aaKnown RBP10.7□□□□□ -0.7
MCF2L-223ENST00000473345 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-223ENST00000473345 COLEC11Q9BWP8 271 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 POLD4Q9HCU8 107 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■■■■ 36.3
MCF2L-223ENST00000473345 CDH7Q9ULB5 785 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 VWA8A3KMH1 1905 aa10.7□□□□□ -0.7
MCF2L-223ENST00000473345 TDRD15B5MCY1 1934 aaKnown RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 A0A1B0GUA9 196 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 KANSL1LA0AUZ9 987 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 ERLIN2O94905 339 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 C8AP07357 584 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 TDGF1P13385 188 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 AXLP30530 894 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 GRIK3Q13003 919 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 HSP90AA2PQ14568 343 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 PUM1Q14671 1186 aaKnown RBP eCLIP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 MLF2Q15773 248 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 MAEAQ7L5Y9 396 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 NEK8Q86SG6 692 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 TPH2Q8IWU9 490 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 C3orf58Q8NDZ4 430 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 POLR3FQ9H1D9 316 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 SLKQ9H2G2 1235 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-223ENST00000473345 LTB4R2Q9NPC1 389 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 CEP250Q9BV73 2442 aa10.69□□□□□ -0.7
MCF2L-223ENST00000473345 COL4A2P08572 1712 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 FAM170BA6NMN3 283 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 I3L4J1 428 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 MEFVO15553 781 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-223ENST00000473345 ASAP2O43150 1006 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 LILRB5O75023 590 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 LYPLA2O95372 231 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 SPATA31C1P0DKV0 1188 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 FCARP24071 287 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 RARRES1P49788 294 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
MCF2L-223ENST00000473345 CSTF1Q05048 431 aaKnown RBP10.68□□□□□ -0.7
MCF2L-223ENST00000473345 POU5F1BQ06416 359 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 UBXN2BQ14CS0 331 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 GPR65Q8IYL9 337 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 ZBTB44Q8NCP5 570 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 SLC7A14Q8TBB6 771 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 CCDC51Q96ER9 411 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-223ENST00000473345 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 PDZD7Q9H5P4 517 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 ZSWIM4Q9H7M6 989 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms