RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 MLH1P40692 756 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 AFMP43652 599 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 SMTNP53814 917 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 EHHADHQ08426 723 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 COASYQ13057 564 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
TPM3-216ENST00000473036 COL19A1Q14993 1142 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 PTCRAQ6ISU1 281 aaPredicted RBP14.39□□□□□ -0.11
TPM3-216ENST00000473036 TMEM173Q86WV6 379 aaPredicted RBP14.39□□□□□ -0.11
TPM3-216ENST00000473036 ENGASEQ8NFI3 743 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.39□□□□□ -0.11
TPM3-216ENST00000473036 MRPL4Q9BYD3 311 aaKnown RBP14.39□□□□□ -0.11
TPM3-216ENST00000473036 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 NRDE2Q9H7Z3 1164 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 PANK4Q9NVE7 773 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 DNAJB4Q9UDY4 337 aa14.39□□□□□ -0.11
TPM3-216ENST00000473036 CITO14578 2027 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 FAM86C2PA6NEL3 165 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 PTGESO14684 152 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 HOXA2O43364 376 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 DCXO43602 365 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 FAM189A1O60320 539 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 POMCP01189 267 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 PIGRP01833 764 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 ITGB1P05556 798 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 PRR29P0C7W0 189 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 IDEP14735 1019 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 SCNN1GP51170 649 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 NCBP1Q09161 790 aaKnown RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 NAB2Q15742 525 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 ZBTB41Q5SVQ8 909 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 MAP4K3Q8IVH8 894 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 TMEM130Q8N3G9 435 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 KLHL23Q8NBE8 558 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 BCL7CQ8WUZ0 217 aaPredicted RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
TPM3-216ENST00000473036 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 PDCD11Q14690 1871 aaKnown RBP14.38□□□□□ -0.11
TPM3-216ENST00000473036 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 F8W810 466 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 RECQL4O94761 1208 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 GAP43P17677 238 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 SYKP43405 635 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 GPM6BQ13491 265 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 HERC4Q5GLZ8 1057 aaPredicted RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 GLB1LQ6UWU2 654 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 FMR1NBQ8N0W7 255 aaPredicted RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 CNNM3Q8NE01 707 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 ZSWIM2Q8NEG5 633 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 SPPL3Q8TCT6 385 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 PABPC5Q96DU9 382 aaKnown RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
TPM3-216ENST00000473036 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 GDAQ9Y2T3 454 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 GIT1Q9Y2X7 761 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 ANK1P16157 1881 aa14.37□□□□□ -0.11
TPM3-216ENST00000473036 ZMYM2Q9UBW7 1377 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 TOM1L1O75674 476 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ZNF202O95125 648 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 RB1P06400 928 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 GALTP07902 379 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ADSSP30520 456 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 IRS1P35568 1242 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 SLC11A1P49279 550 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 BCAR1P56945 870 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 OSTNP61366 133 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ASIC1P78348 528 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 MCL1Q07820 350 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 DSC1Q08554 894 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 STRN3Q13033 797 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 TMEM132AQ24JP5 1023 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 DCAF4L1Q3SXM0 396 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ZNF568Q3ZCX4 644 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 KCNT2Q6UVM3 1135 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 MPZL3Q6UWV2 235 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ALKAL1Q6UXT8 129 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 ZPBP2Q6X784 338 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 KRBA2Q6ZNG9 492 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
TPM3-216ENST00000473036 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
TPM3-216ENST00000473036 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 PAAF1Q9BRP4 392 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 PLVAPQ9BX97 442 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 VN1R3Q9BXE9 311 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 SEL1LQ9UBV2 794 aa14.36□□□□□ -0.11
TPM3-216ENST00000473036 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms