RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SNX32Q86XE0 403 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 SPACA3Q8IXA5 215 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TRMT2AQ8IZ69 625 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 MFSD4AQ8N468 514 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ZNF655Q8N720 491 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 ZNF713Q8N859 430 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 NAT16Q8N8M0 369 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 DAGLBQ8NCG7 672 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 GAB3Q8WWW8 586 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MAELQ96JY0 434 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 MRGPRX1Q96LB2 322 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 KCNC2Q96PR1 638 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 PLVAPQ9BX97 442 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 RSPH9Q9H1X1 276 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 KCNH7Q9NS40 1196 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 GJD2Q9UKL4 321 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ATP23Q9Y6H3 246 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.11□□□□□ -1.91
XRN1-210ENST00000472697 LTBP4Q8N2S1 1624 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MADDQ8WXG6 1647 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 STRCQ7RTU9 1775 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MEGF11A6BM72 1044 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 IFNL4K9M1U5 179 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 PODXLO00592 558 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TOR1BO14657 336 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 P4HA2O15460 535 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 DNTTP04053 509 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 NCAM1P13591 858 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 HSD3B1P14060 373 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CD40P25942 277 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 SERPINF1P36955 418 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MCAMP43121 646 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 DCAF7P61962 342 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 RPL11P62913 178 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 DAG1Q14118 895 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 NFKBIBQ15653 356 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TAF12Q16514 161 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TIGD5Q53EQ6 642 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 FIGNQ5HY92 759 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ZKSCAN2Q63HK3 967 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 FAAH2Q6GMR7 532 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 FOXR1Q6PIV2 292 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 LYPD4Q6UWN0 246 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 UNC13DQ70J99 1090 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 WAPLQ7Z5K2 1190 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 KCTD20Q7Z5Y7 419 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 DNAJB7Q7Z6W7 309 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 Q8NFD4 153 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TNPO1Q92973 898 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 GMCL1Q96IK5 515 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 CDK5RAP3Q96JB5 506 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 MEGF10Q96KG7 1140 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ZSCAN31Q96LW9 406 aaPredicted RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 SAMD11Q96NU1 681 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ACAP3Q96P50 834 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 IL21RQ9HBE5 538 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 ZNF287Q9HBT7 754 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 UBN1Q9NPG3 1134 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 STARD7Q9NQZ5 370 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 SH3GLB2Q9NR46 395 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 OGDHLQ9ULD0 1010 aa3.11□□□□□ -1.91
XRN1-210ENST00000472697 TDRD9Q8NDG6 1382 aaKnown RBP3.11□□□□□ -1.91
XRN1-210ENST00000472697 PRSS29PA6NIE9 313 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SGSM2O43147 1006 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MGEA5O60502 916 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 BAIAP3O94812 1187 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MPIG6BO95866 241 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FSTP19883 344 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RGS2P41220 211 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TECP42680 631 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 EIF5P55010 431 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 PSMC6P62333 389 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FOXO4P98177 505 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CD69Q07108 199 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ADGRE1Q14246 886 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MBTPS1Q14703 1052 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PDCD2Q16342 344 aaPredicted RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 ARHGAP44Q17R89 818 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ZACNQ401N2 412 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 LRRC24Q50LG9 513 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 BTBD8Q5XKL5 378 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RAP1GAP2Q684P5 730 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MZT2BQ6NZ67 158 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 DPP9Q86TI2 863 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 STK32CQ86UX6 486 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FBXO11Q86XK2 927 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ZBTB8BQ8NAP8 495 aaPredicted RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 UHMK1Q8TAS1 419 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 ZNF566Q969W8 418 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ZBTB10Q96DT7 871 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TMEM41AQ96HV5 264 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 HHIPL1Q96JK4 782 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ZMAT2Q96NC0 199 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 AP1M1Q9BXS5 423 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RC3H2Q9HBD1 1191 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 KIAA1586Q9HCI6 787 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SLC6A20Q9NP91 592 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PRDM7Q9NQW5 492 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PGAP2Q9UHJ9 254 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms