RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 SCLT1Q96NL6 688 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 NT5C3AQ9H0P0 336 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 SUCLA2Q9P2R7 463 aaPredicted RBP10.12□□□□□ -0.79
SMC4-213ENST00000472282 RCOR1Q9UKL0 485 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 PLXNA3P51805 1871 aa10.12□□□□□ -0.79
SMC4-213ENST00000472282 A0A0U1RQF3 1178 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 FSCN2O14926 492 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 SLC26A4O43511 780 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 EYA4O95677 639 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMC4-213ENST00000472282 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 TXLNAP40222 546 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 RFC5P40937 340 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 NNTQ13423 1086 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 AXDND1Q5T1B0 1012 aaPredicted RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 THNSL1Q8IYQ7 743 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 HELQQ8TDG4 1101 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 LPPQ93052 612 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 MSLNLQ96KJ4 702 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 NLRP4Q96MN2 994 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 JPH2Q9BR39 696 aaPredicted RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 CCSER1Q9C0I3 900 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 SCAND2PQ9GZW5 306 aaPredicted RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 MINDY3Q9H8M7 445 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 IFT122Q9HBG6 1241 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 XPNPEP1Q9NQW7 623 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 DBR1Q9UK59 544 aaKnown RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 BARX2Q9UMQ3 279 aaPredicted RBP10.11□□□□□ -0.79
SMC4-213ENST00000472282 PCDHA7Q9UN72 937 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 PCDHB12Q9Y5F1 795 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 C2orf16Q68DN1 1984 aa10.11□□□□□ -0.79
SMC4-213ENST00000472282 TRIP11Q15643 1979 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 A0A087X0B3 334 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 NT5C1B-RDH14C9J2C7 533 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 PI4K2BG5E9Z4 385 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 B4GALT3O60512 393 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 SSBP05455 408 aaKnown RBP eCLIP10.1□□□□□ -0.799e-17■■■■■ 55.5
SMC4-213ENST00000472282 LAG3P18627 525 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 NDUFV1P49821 464 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 SMAD2Q15796 467 aaKnown RBP10.1□□□□□ -0.79
SMC4-213ENST00000472282 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 KCNT2Q6UVM3 1135 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
SMC4-213ENST00000472282 C1QTNF1Q9BXJ1 281 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 GCOM2Q9BZD3 368 aaPredicted RBP10.1□□□□□ -0.79
SMC4-213ENST00000472282 TLR9Q9NR96 1032 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 BLOC1S4Q9NUP1 217 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 CCDC39Q9UFE4 941 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 CD207Q9UJ71 328 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 DNM3Q9UQ16 869 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 DENND4AQ7Z401 1863 aa10.1□□□□□ -0.79
SMC4-213ENST00000472282 HIDE1A8MVS5 230 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 SPTLC1O15269 473 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 NCK2O43639 380 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 GAS2O43903 313 aaKnown RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 ADH1CP00326 375 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PLA2G4BP0C869 781 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 PHKA2P46019 1235 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 DNM2P50570 870 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 UBE3AQ05086 875 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 SMAD4Q13485 552 aaKnown RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 KCNC3Q14003 757 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 DUSP6Q16828 381 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PLPP4Q5VZY2 271 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 FAM43BQ6ZT52 329 aaPredicted RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 MAEAQ7L5Y9 396 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 ZNF410Q86VK4 478 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 ADHFE1Q8IWW8 467 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 SLC39A11Q8N1S5 342 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 LRRC43Q8N309 656 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 KCTD17Q8N5Z5 321 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PDILTQ8N807 584 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 LARP4BQ92615 738 aaKnown RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 RAD54LQ92698 747 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 RUSC1Q9BVN2 902 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PANK2Q9BZ23 570 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
SMC4-213ENST00000472282 TLE6Q9H808 572 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 GPRC5CQ9NQ84 441 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 FAM105AQ9NUU6 356 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 PIN4Q9Y237 131 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms