RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ACOT2P49753 483 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
CCM2-205ENST00000472223 MLLT1Q03111 559 aaPredicted RBP18.35■□□□□ 0.53
CCM2-205ENST00000472223 SURF1Q15526 300 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 ZCWPW2Q504Y3 356 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 ECHDC2Q86YB7 292 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 CD302Q8IX05 232 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 FAM212AQ96EL1 285 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 TMEM161AQ9NX61 479 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
CCM2-205ENST00000472223 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 MKI67P46013 3256 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 C9IYK1 514 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 IKBKBO14920 756 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 SLC16A3O15427 465 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 IL18RAPO95256 599 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 TPM2P07951 284 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 PMS1P54277 932 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 PPP2R3AQ06190 1150 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 SNRNP35Q16560 246 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 MRPL10Q7Z7H8 261 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 AOPEPQ8N6M6 819 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 RSPH1Q8WYR4 309 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 FNBP1Q96RU3 617 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 RPS6KC1Q96S38 1066 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 MKNK1Q9BUB5 465 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 THAP9Q9H5L6 903 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 PLEKHA5Q9HAU0 1116 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 DMAC2Q9NW81 257 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 SNTG2Q9NY99 539 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 RBAKQ9NYW8 714 aaPredicted RBP18.34■□□□□ 0.53
CCM2-205ENST00000472223 NFE2L3Q9Y4A8 694 aa18.34■□□□□ 0.53
CCM2-205ENST00000472223 ABLIM1O14639 778 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 MAPK13O15264 365 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 MAGEA10P43363 369 aaPredicted RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 FAM189BP81408 668 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 TMEM240Q5SV17 173 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 GLB1LQ6UWU2 654 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 INTS8Q75QN2 995 aaKnown RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 URGCPQ8TCY9 931 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 DUSP9Q99956 384 aaKnown RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCM2-205ENST00000472223 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 HAPLN2Q9GZV7 340 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 NXF3Q9H4D5 531 aaKnown RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 CPSF3Q9UKF6 684 aaKnown RBP18.33■□□□□ 0.52
CCM2-205ENST00000472223 GIT1Q9Y2X7 761 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 MICAL3Q7RTP6 2002 aa18.33■□□□□ 0.52
CCM2-205ENST00000472223 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
CCM2-205ENST00000472223 UPP2O95045 317 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 AKAP5P24588 427 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 SMG8Q8ND04 991 aaKnown RBP18.32■□□□□ 0.52
CCM2-205ENST00000472223 HERVK_113Q902F9 699 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 FBXL18Q96ME1 805 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 TSPAN18Q96SJ8 248 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 RSAD1Q9HA92 442 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 ARMCX3Q9UH62 379 aaPredicted RBP18.32■□□□□ 0.52
CCM2-205ENST00000472223 R3HCC1Q9Y3T6 440 aaKnown RBP18.32■□□□□ 0.52
CCM2-205ENST00000472223 HES2Q9Y543 173 aa18.32■□□□□ 0.52
CCM2-205ENST00000472223 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
CCM2-205ENST00000472223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.31■□□□□ 0.52
CCM2-205ENST00000472223 H0YGN5 161 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 STX10O60499 249 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 RECQL4O94761 1208 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 WDR5P61964 334 aaKnown RBP18.31■□□□□ 0.52
CCM2-205ENST00000472223 SPAG1Q07617 926 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCM2-205ENST00000472223 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 FRMD5Q7Z6J6 570 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 CBWD2Q8IUF1 395 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 CEP120Q8N960 986 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
CCM2-205ENST00000472223 LINC01599Q8WXQ3 324 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 EEF2KMTQ96G04 330 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 ASB7Q9H672 318 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 CBX8Q9HC52 389 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
CCM2-205ENST00000472223 CITO14578 2027 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 AKAP3O75969 853 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 CXCL8P10145 99 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 TNNI1P19237 187 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 TNFSF9P41273 254 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
CCM2-205ENST00000472223 CYP24A1Q07973 514 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 TCERG1LQ5VWI1 586 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 BRSK2Q8IWQ3 736 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 ZC3H3Q8IXZ2 948 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms