RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 POLGP54098 1239 aaPredicted RBP16.18■□□□□ 0.18
UBXN11-213ENST00000472155 GPD1LQ8N335 351 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 RDM1Q8NG50 284 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 ATP8B3O60423 1300 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 LRRIQ4A6NIV6 560 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 HARSP12081 509 aaKnown RBP16.18■□□□□ 0.18
UBXN11-213ENST00000472155 KRT5P13647 590 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
UBXN11-213ENST00000472155 GPC5P78333 572 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 CRELD2Q6UXH1 353 aaPredicted RBP16.18■□□□□ 0.18
UBXN11-213ENST00000472155 PAGR1Q9BTK6 254 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 TARS2Q9BW92 718 aaKnown RBP16.18■□□□□ 0.18
UBXN11-213ENST00000472155 NFASCO94856 1347 aa16.18■□□□□ 0.18
UBXN11-213ENST00000472155 HSF2BPO75031 334 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 RTN2O75298 545 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 MFAP3P55082 362 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 TRIM50Q86XT4 487 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 ANKFY1Q9P2R3 1169 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 PTPRFP10586 1907 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 BHMG1C9JSJ3 638 aaPredicted RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 PGK2P07205 417 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 LIG4P49917 911 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 STXBP2Q15833 593 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 LY6KQ17RY6 165 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 XKR3Q5GH77 459 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 UBAP2Q5T6F2 1119 aaKnown RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 TDRD10Q5VZ19 366 aaKnown RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 FAM76AQ8TAV0 307 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 C18orf8Q96DM3 657 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 CALR3Q96L12 384 aaKnown RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 NT5C1BQ96P26 610 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 CEP89Q96ST8 783 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 NUP85Q9BW27 656 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
UBXN11-213ENST00000472155 UMODL1Q5DID0 1318 aa16.17■□□□□ 0.18
UBXN11-213ENST00000472155 GSTTP1A0A1W2PQM5 241 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 IRF6O14896 467 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 MARK3P27448 753 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 ATP1A2P50993 1020 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 GNPTABQ3T906 1256 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 GADL1Q6ZQY3 521 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 NCAPG2Q86XI2 1143 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 TMEM130Q8N3G9 435 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 ZNF653Q96CK0 615 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 FBXO40Q9UH90 709 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 PLAAQ9Y263 795 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 PAPPA2Q9BXP8 1791 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 ARIH2O95376 493 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 VNN1O95497 513 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 OATP04181 439 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 PYGMP11217 842 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 HSD17B3P37058 310 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 BRDTQ58F21 947 aaPredicted RBP16.16■□□□□ 0.18
UBXN11-213ENST00000472155 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 CPA5Q8WXQ8 436 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 IFT74Q96LB3 600 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 ELP3Q9H9T3 547 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
UBXN11-213ENST00000472155 PMM2O15305 246 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 TNNI1P19237 187 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 PEX5P50542 639 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 MCCD1P59942 119 aaPredicted RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 APOBEC3GQ9HC16 384 aaKnown RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 ANKRD65E5RJM6 399 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 FARP2O94887 1054 aaPredicted RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 CDR2Q01850 454 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 NNTQ13423 1086 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 TTC27Q6P3X3 843 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 C15orf39Q6ZRI6 1047 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 RHOT2Q8IXI1 618 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 GPC2Q8N158 579 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 OR5B17Q8NGF7 314 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 ZNF564Q8TBZ8 553 aaPredicted RBP16.15■□□□□ 0.18
UBXN11-213ENST00000472155 CARD9Q9H257 536 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 TXNRD2Q9NNW7 524 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 CEP350Q5VT06 3117 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 CCDC66A2RUB6 948 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 ATG7O95352 703 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 TNFSF9P41273 254 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 ALS2CLQ60I27 953 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 PASD1Q8IV76 773 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 RUFY1Q96T51 708 aa16.15■□□□□ 0.18
UBXN11-213ENST00000472155 ZSWIM1Q9BR11 485 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms