RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 UBALD2Q8IYN6 164 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 CACNG4Q9UBN1 327 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 DPP7Q9UHL4 492 aa24.86■■□□□ 1.57
C9orf3-213ENST00000471978 LAD1O00515 517 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 RECQL4O94761 1208 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 ASGR2P07307 311 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 HSP90AA2PQ14568 343 aaPredicted RBP24.85■■□□□ 1.57
C9orf3-213ENST00000471978 EEF1DP3Q658K8 133 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 MCTP1Q6DN14 999 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 CCDC149Q6ZUS6 474 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 CMASQ8NFW8 434 aaPredicted RBP24.85■■□□□ 1.57
C9orf3-213ENST00000471978 ACSF2Q96CM8 615 aaPredicted RBP24.85■■□□□ 1.57
C9orf3-213ENST00000471978 PAAF1Q9BRP4 392 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 DNM3Q9UQ16 869 aa24.85■■□□□ 1.57
C9orf3-213ENST00000471978 PP2D1A8MPX8 630 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 PTGESO14684 152 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 BRD1O95696 1058 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 THP07101 528 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 MYBP10242 640 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 IL17AQ16552 155 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 IER5LQ5T953 404 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 KRT79Q5XKE5 535 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 DTHD1Q6ZMT9 781 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 OTOP3Q7RTS5 596 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 GPR65Q8IYL9 337 aa24.84■■□□□ 1.57
C9orf3-213ENST00000471978 RIN2Q8WYP3 895 aaPredicted RBP24.84■■□□□ 1.57
C9orf3-213ENST00000471978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.84■■□□□ 1.57
C9orf3-213ENST00000471978 CCDC195A0A1B0GUA6 201 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 CASTOR2A6NHX0 329 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 E9PMD0 336 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 SPATA31D3P0C874 917 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 PRPHP41219 470 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 DCAF4L1Q3SXM0 396 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 SPATA31D4Q6ZUB0 917 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 PALB2Q86YC2 1186 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 CXCL16Q9H2A7 254 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.83■■□□□ 1.57
C9orf3-213ENST00000471978 GDAQ9Y2T3 454 aa24.83■■□□□ 1.57
C9orf3-213ENST00000471978 PLXNA3P51805 1871 aa24.83■■□□□ 1.56
C9orf3-213ENST00000471978 SF3B1O75533 1304 aaKnown RBP eCLIP24.83■■□□□ 1.564e-6■■■■■ 124.1
C9orf3-213ENST00000471978 MYO10Q9HD67 2058 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 K7ERI5 159 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 CDC25AP30304 524 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 NT5DC1Q5TFE4 455 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 ATF7IP2Q5U623 682 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 DENND4AQ7Z401 1863 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 GLYCTKQ8IVS8 523 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 HASPINQ8TF76 798 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 TMX3Q96JJ7 454 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 SMOC2Q9H3U7 446 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 FNIP2Q9P278 1114 aa24.82■■□□□ 1.56
C9orf3-213ENST00000471978 CCDC169A6NNP5 214 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 RFPL2O75678 378 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 C1RP00736 705 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 PDGFBP01127 241 aaPredicted RBP24.81■■□□□ 1.56
C9orf3-213ENST00000471978 RPL17P18621 184 aaKnown RBP24.81■■□□□ 1.56
C9orf3-213ENST00000471978 VCPP55072 806 aaKnown RBP24.81■■□□□ 1.56
C9orf3-213ENST00000471978 PEX3P56589 373 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 CREMQ03060 361 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 RILPL1Q5EBL4 403 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 ALYREFQ86V81 257 aaKnown RBP24.81■■□□□ 1.56
C9orf3-213ENST00000471978 PRSS33Q8NF86 280 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 HDAC7Q8WUI4 952 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 PRRX2Q99811 253 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 PLEKHA4Q9H4M7 779 aa24.81■■□□□ 1.56
C9orf3-213ENST00000471978 DAXXQ9UER7 740 aaPredicted RBP24.81■■□□□ 1.56
C9orf3-213ENST00000471978 C2orf16Q68DN1 1984 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 TGM5O43548 720 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 HIP1RO75146 1068 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 KIF4AO95239 1232 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 NPTX2P47972 431 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 NAB2Q15742 525 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 RTP2Q5QGT7 225 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 PRSS55Q6UWB4 352 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-213ENST00000471978 CYP26C1Q6V0L0 522 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 APBB1IPQ7Z5R6 666 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-213ENST00000471978 MMTAG2Q9BU76 263 aaKnown RBP24.8■■□□□ 1.56
C9orf3-213ENST00000471978 RHOBTB2Q9BYZ6 727 aa24.8■■□□□ 1.56
C9orf3-213ENST00000471978 UPF2Q9HAU5 1272 aaKnown RBP24.8■■□□□ 1.56
C9orf3-213ENST00000471978 GJB2P29033 226 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 AVPR2P30518 371 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 ZRSR1Q15695 479 aaKnown RBP24.79■■□□□ 1.56
C9orf3-213ENST00000471978 FAM171A1Q5VUB5 890 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 RINT1Q6NUQ1 792 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 KCNK18Q7Z418 384 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 DAW1Q8N136 415 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 SMG7Q92540 1137 aaKnown RBP24.79■■□□□ 1.56
C9orf3-213ENST00000471978 DRC1Q96MC2 740 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 TTPALQ9BTX7 342 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 RUSC1Q9BVN2 902 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 WDR6Q9NNW5 1121 aaKnown RBP24.79■■□□□ 1.56
C9orf3-213ENST00000471978 TNFSF13BQ9Y275 285 aa24.79■■□□□ 1.56
C9orf3-213ENST00000471978 H3BQV1 296 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 CD2BP2O95400 341 aaKnown RBP24.78■■□□□ 1.56
C9orf3-213ENST00000471978 PTPN5P54829 565 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 ATP2C1P98194 919 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-213ENST00000471978 DMP1Q13316 513 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-213ENST00000471978 LILRA6Q6PI73 481 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 CEP57Q86XR8 500 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 KMT5AQ9NQR1 393 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms