RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 DDX53Q86TM3 631 aaKnown RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 COLGALT2Q8IYK4 626 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 PDILTQ8N807 584 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 LRRC15Q8TF66 581 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 ACO2Q99798 780 aaKnown RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
SSR4-208ENST00000471880 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 ARHGAP28Q9P2N2 729 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 TNFSF13BQ9Y275 285 aa16.25■□□□□ 0.19
SSR4-208ENST00000471880 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 H0YCG3 227 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 SPTLC2O15270 562 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 F13A1P00488 732 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 URODP06132 367 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 THP07101 528 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 DDIT3P35638 169 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 CEP120Q8N960 986 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
SSR4-208ENST00000471880 HASPINQ8TF76 798 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 SPIRE2Q8WWL2 714 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
SSR4-208ENST00000471880 ZBP1Q9H171 429 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 CDT1Q9H211 546 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 PARVGQ9HBI0 331 aa16.24■□□□□ 0.19
SSR4-208ENST00000471880 F8W810 466 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 TADA2AO75478 443 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 GLP2RO95838 553 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 CTSAP10619 480 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 NASPP49321 788 aaPredicted RBP16.23■□□□□ 0.19
SSR4-208ENST00000471880 LIG4P49917 911 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 PKP1Q13835 747 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 SV2BQ7L1I2 683 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 TAS1R3Q7RTX0 852 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 HAUS6Q7Z4H7 955 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 FAM178BQ8IXR5 827 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 TMEM161BQ8NDZ6 487 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 VN1R2Q8NFZ6 395 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 MRPL17Q9NRX2 175 aaKnown RBP16.23■□□□□ 0.19
SSR4-208ENST00000471880 STK17AQ9UEE5 414 aa16.23■□□□□ 0.19
SSR4-208ENST00000471880 MBTPS2O43462 519 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 TRAK2O60296 914 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
SSR4-208ENST00000471880 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
SSR4-208ENST00000471880 KLRC2P26717 231 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 ME1P48163 572 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 DSC1Q08554 894 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 TUSC3Q13454 348 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 SMAD4Q13485 552 aaKnown RBP16.22■□□□□ 0.19
SSR4-208ENST00000471880 GIT2Q14161 759 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 SEZ6Q53EL9 994 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 LINC00301Q8NCQ3 95 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 ZBTB45Q96K62 511 aaPredicted RBP16.22■□□□□ 0.19
SSR4-208ENST00000471880 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 EMILIN2Q9BXX0 1053 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 TOPORSQ9NS56 1045 aaPredicted RBP16.22■□□□□ 0.19
SSR4-208ENST00000471880 MARCH5Q9NX47 278 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 PLXNA3P51805 1871 aa16.22■□□□□ 0.19
SSR4-208ENST00000471880 PTGESO14684 152 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
SSR4-208ENST00000471880 INPPL1O15357 1258 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 CLDN3O15551 220 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 CLASP2O75122 1294 aaKnown RBP16.21■□□□□ 0.19
SSR4-208ENST00000471880 SOD2P04179 222 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 MCF2P10911 925 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 IDEP14735 1019 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 GRM5P41594 1212 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 GLUD2P49448 558 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 HSP90AA2PQ14568 343 aaPredicted RBP16.21■□□□□ 0.19
SSR4-208ENST00000471880 NOLC1Q14978 699 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSR4-208ENST00000471880 CEP57Q86XR8 500 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 GSTCDQ8NEC7 633 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 CASP10Q92851 521 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 B3GALT6Q96L58 329 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 ACAP3Q96P50 834 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 TBC1D7Q9P0N9 293 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 STK39Q9UEW8 545 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 ADAM28Q9UKQ2 775 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 HCFC2Q9Y5Z7 792 aa16.21■□□□□ 0.19
SSR4-208ENST00000471880 CITO14578 2027 aa16.21■□□□□ 0.18
SSR4-208ENST00000471880 PPP6R2O75170 966 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 TOM1L1O75674 476 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 YEATS4O95619 227 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 MYBP10242 640 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
SSR4-208ENST00000471880 NCKAP1LP55160 1127 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 BECN1Q14457 450 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
SSR4-208ENST00000471880 FUT10Q6P4F1 479 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms