RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 FRMD5Q7Z6J6 570 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 FAM114A1Q8IWE2 563 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 SEPT8Q92599 483 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 TRIM6Q9C030 488 aaPredicted RBP20.89■□□□□ 0.94
PSPC1-203ENST00000471658 CXCL16Q9H2A7 254 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 GRPEL1Q9HAV7 217 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 ARMCX3Q9UH62 379 aaPredicted RBP20.89■□□□□ 0.94
PSPC1-203ENST00000471658 LIMA1Q9UHB6 759 aaKnown RBP20.89■□□□□ 0.94
PSPC1-203ENST00000471658 IPPQ9Y573 584 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 PCDHB2Q9Y5E7 798 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 TANC1Q9C0D5 1861 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 TET1Q8NFU7 2136 aa20.89■□□□□ 0.94
PSPC1-203ENST00000471658 GNA14O95837 355 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 SYN1P17600 705 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 AKAP5P24588 427 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 GRM5P41594 1212 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 MARSP56192 900 aaKnown RBP20.89■□□□□ 0.93
PSPC1-203ENST00000471658 DLG4P78352 724 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 FANCCQ00597 558 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 CYP24A1Q07973 514 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 ENOX2Q16206 610 aaKnown RBP20.89■□□□□ 0.93
PSPC1-203ENST00000471658 UVSSAQ2YD98 709 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 MFSD5Q6N075 450 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 FAM84AQ96KN4 292 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 MFSD14AQ96MC6 490 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 HTATIP2Q9BUP3 242 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 VPS16Q9H269 839 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 KIAA1586Q9HCI6 787 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 FAM105AQ9NUU6 356 aa20.89■□□□□ 0.93
PSPC1-203ENST00000471658 RBAKQ9NYW8 714 aaPredicted RBP20.89■□□□□ 0.93
PSPC1-203ENST00000471658 MEIS3P2A8K0S8 358 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 PARNO95453 639 aaKnown RBP20.88■□□□□ 0.93
PSPC1-203ENST00000471658 CXCL8P10145 99 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 EEF1GP26641 437 aaKnown RBP20.88■□□□□ 0.93
PSPC1-203ENST00000471658 TRIM59Q8IWR1 403 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 DPF3Q92784 378 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 CCDC127Q96BQ5 260 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 FAM212AQ96EL1 285 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 POP1Q99575 1024 aaKnown RBP20.88■□□□□ 0.93
PSPC1-203ENST00000471658 TUBGCP2Q9BSJ2 902 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 PDE11AQ9HCR9 933 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 RGS18Q9NS28 235 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 RNF19AQ9NV58 838 aa20.88■□□□□ 0.93
PSPC1-203ENST00000471658 ZMYND8Q9ULU4 1186 aaPredicted RBP20.88■□□□□ 0.93
PSPC1-203ENST00000471658 EVI5O60447 810 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 CLTAP09496 248 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 TRIM49P0CI25 452 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 TRIM49CP0CI26 452 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 C1orf220Q5T0J3 134 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 BRSK2Q8IWQ3 736 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 BADQ92934 168 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 LPPQ93052 612 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 NAP1L5Q96NT1 182 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-203ENST00000471658 PRKAG2Q9UGJ0 569 aa20.87■□□□□ 0.93
PSPC1-203ENST00000471658 ENPP3O14638 875 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 MAPK13O15264 365 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 SERPINC1P01008 464 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 ACRP10323 421 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 PRKCSHP14314 528 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 VAMP7P51809 220 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 COPB1P53618 953 aaKnown RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 SPAG1Q07617 926 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 BFSP1Q12934 665 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 SLC10A6Q3KNW5 377 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 DCAF17Q5H9S7 520 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 LMBRD2Q68DH5 695 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 APBB1IPQ7Z5R6 666 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 TMEM199Q8N511 208 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 ACAP3Q96P50 834 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 CCDC94Q9BW85 323 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 RPF1Q9H9Y2 349 aaKnown RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 METTL14Q9HCE5 456 aaKnown RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 TOPORSQ9NS56 1045 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 KLK14Q9P0G3 267 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 A0A0U1RQF3 1178 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 LRRC10BA6NIK2 292 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 C9IYK1 514 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 KRT13P13646 458 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 ATF7P17544 494 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 RFC2P35250 354 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 PSMD6Q15008 389 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 PTPN21Q16825 1174 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 MIIPQ5JXC2 388 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 TCERG1LQ5VWI1 586 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 INTS8Q75QN2 995 aaKnown RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 PARD3BQ8TEW8 1205 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 TRAIPQ9BWF2 469 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 FTHL17Q9BXU8 183 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 TSPYL2Q9H2G4 693 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-203ENST00000471658 IFNKQ9P0W0 207 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 PARP2Q9UGN5 583 aa20.86■□□□□ 0.93
PSPC1-203ENST00000471658 LRRIQ3A6PVS8 624 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-203ENST00000471658 LACTBL1A8MY62 500 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 RECQL4O94761 1208 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 DLATP10515 647 aaKnown RBP20.85■□□□□ 0.93
PSPC1-203ENST00000471658 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
PSPC1-203ENST00000471658 ECHDC2Q86YB7 292 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 APBB2Q92870 758 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 SLC35C1Q96A29 364 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms