RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 DHX58Q96C10 678 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
LINC00888-202ENST00000471496 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 TBC1D13Q9NVG8 400 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 MIOSQ9NXC5 875 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 ATP6V1DQ9Y5K8 247 aa13.61□□□□□ -0.23
LINC00888-202ENST00000471496 XIRP2A4UGR9 3374 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 FRMD3A2A2Y4 597 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 ARL5CA6NH57 179 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 TRAK2O60296 914 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 FAM13AO94988 1023 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 AKAP5P24588 427 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 PBX3P40426 434 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 SMTNP53814 917 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 ZNF280BQ86YH2 543 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 SPPL3Q8TCT6 385 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 GAD1Q99259 594 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 MRPL9Q9BYD2 267 aaKnown RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 MRPL4Q9BYD3 311 aaKnown RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 TNMDQ9H2S6 317 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 CUEDC2Q9H467 287 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 GDPD2Q9HCC8 539 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
LINC00888-202ENST00000471496 KCNG1Q9UIX4 513 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 HPSEQ9Y251 543 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 INPP5FQ9Y2H2 1132 aa13.6□□□□□ -0.23
LINC00888-202ENST00000471496 FAM237AA0A1B0GTK4 181 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
LINC00888-202ENST00000471496 DDHD2O94830 711 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 LAG3P18627 525 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 CMA1P23946 247 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 NMT1P30419 496 aaKnown RBP13.59□□□□□ -0.23
LINC00888-202ENST00000471496 MLH1P40692 756 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 KCNT2Q6UVM3 1135 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 SFR1Q86XK3 245 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 CEP120Q8N960 986 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 MRPL38Q96DV4 380 aaKnown RBP13.59□□□□□ -0.23
LINC00888-202ENST00000471496 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
LINC00888-202ENST00000471496 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
LINC00888-202ENST00000471496 HAPLN2Q9GZV7 340 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 CDT1Q9H211 546 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 UBN1Q9NPG3 1134 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 DNAJB4Q9UDY4 337 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
LINC00888-202ENST00000471496 A0A1B0GVL5 298 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 RNF40O75150 1001 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 FGF18O76093 207 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 POMCP01189 267 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 PIGRP01833 764 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 PFKFB1P16118 471 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 BCAR1P56945 870 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 GTF2BQ00403 316 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 DCAF4L1Q3SXM0 396 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 ZC2HC1CQ53FD0 456 aaPredicted RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 SWT1Q5T5J6 900 aaKnown RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 ZPBP2Q6X784 338 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 TMEM173Q86WV6 379 aaPredicted RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 SLC39A11Q8N1S5 342 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
LINC00888-202ENST00000471496 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 TRIM9Q9C026 710 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 SNTG2Q9NY99 539 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 FAM13BQ9NYF5 915 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 PCDHB12Q9Y5F1 795 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 ANK1P16157 1881 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
LINC00888-202ENST00000471496 H0YCG3 227 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 K7ENM7 598 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 PTGESO14684 152 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 ACTN4O43707 911 aaKnown RBP13.57□□□□□ -0.24
LINC00888-202ENST00000471496 RECQL4O94761 1208 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 GALTP07902 379 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 SCNN1GP51170 649 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 CASP5P51878 434 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 DSC1Q08554 894 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 STRN3Q13033 797 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
LINC00888-202ENST00000471496 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
LINC00888-202ENST00000471496 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms