RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 C11orf21Q9P2W6 132 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 EDARQ9UNE0 448 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 RAMP2O60895 175 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 PRKD3O94806 890 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 ABHD16AO95870 558 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 MTHFD2P13995 350 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 LAG3P18627 525 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 MGAT1P26572 445 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 ADRA1BP35368 520 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 BMPR1AP36894 532 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 SREBF1P36956 1147 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 NHLH2Q02577 135 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 SP140Q13342 867 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 LY6G5CQ5SRR4 150 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 EGFLAMQ63HQ2 1017 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 PDZD4Q76G19 769 aaPredicted RBP4.4□□□□□ -1.71
COPS3-206ENST00000471414 PLXDC1Q8IUK5 500 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 ARHGEF19Q8IW93 802 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 SYNE4Q8N205 404 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 TTPALQ9BTX7 342 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 TEX101Q9BY14 249 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
COPS3-206ENST00000471414 TMX1Q9H3N1 280 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 GREM2Q9H772 168 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 IFT122Q9HBG6 1241 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 AKIP1Q9NQ31 210 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 EIF2B4Q9UI10 523 aaKnown RBP4.4□□□□□ -1.71
COPS3-206ENST00000471414 HDAC5Q9UQL6 1122 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 PNPLA7Q6ZV29 1317 aa4.4□□□□□ -1.71
COPS3-206ENST00000471414 CXorf49A8MYA2 514 aaPredicted RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 RNASET2O00584 256 aaKnown RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 ZNF185O15231 689 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 NCR1O76036 304 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 RBP3P10745 1247 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 CANXP27824 592 aaKnown RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 CDK17Q00537 523 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 AGAP9Q5VTM2 703 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 KCNV1Q6PIU1 500 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 REPS2Q8NFH8 660 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 TGFBRAP1Q8WUH2 860 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 FATE1Q969F0 183 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 ADAM2Q99965 735 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 QRSL1Q9H0R6 528 aaKnown RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 ZNF277Q9NRM2 450 aaPredicted RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 CCM2LQ9NUG4 571 aaPredicted RBP4.39□□□□□ -1.71
COPS3-206ENST00000471414 C14orf119Q9NWQ9 140 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 SYBUQ9NX95 663 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 TRPM5Q9NZQ8 1165 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 PRKAB1Q9Y478 270 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 PHLDB1Q86UU1 1377 aa4.39□□□□□ -1.71
COPS3-206ENST00000471414 GOLGA8AA7E2F4 631 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 LPXNO60711 386 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 GCP02774 474 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 ZEB1P37275 1124 aaPredicted RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 MCAMP43121 646 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 SCAND1P57086 179 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 TMPRSS15P98073 1019 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 SRSF2Q01130 221 aaKnown RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 TAP1Q03518 808 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 MGAT2Q10469 447 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 MALLQ13021 153 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 EFCAB12Q6NXP0 572 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 Q6YL49 198 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 RNF169Q8NCN4 708 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 TFAP2CQ92754 450 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 FUBP1Q96AE4 644 aaKnown RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 TOR3AQ9H497 397 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 SPON1Q9HCB6 807 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 RBM12Q9NTZ6 932 aaKnown RBP4.38□□□□□ -1.71
COPS3-206ENST00000471414 PACSIN3Q9UKS6 424 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 SIK3Q9Y2K2 1263 aa4.38□□□□□ -1.71
COPS3-206ENST00000471414 TRIM75PA6NK02 468 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 DRGXA6NNA5 263 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 B3GALT2O43825 422 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 AKR1B10O60218 316 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 TGM1P22735 817 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 ECHS1P30084 290 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 SLC6A9P48067 706 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 CLRN1P58418 232 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 SCAPQ12770 1279 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 SEPT2Q15019 361 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 PTPAQ15257 358 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 INAVAQ3KP66 663 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 TIGD2Q4W5G0 525 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 MUM1L1Q5H9M0 696 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 RNF219Q5W0B1 726 aaPredicted RBP4.37□□□□□ -1.71
COPS3-206ENST00000471414 OTUD7BQ6GQQ9 843 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 RHOT2Q8IXI1 618 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 ZFP28Q8NHY6 868 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 WDR66Q8TBY9 1149 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 COG1Q8WTW3 980 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 LINC00476Q8WZB0 136 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 AHCYL2Q96HN2 611 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms