RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CDC25AP30304 524 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 NPTX2P47972 431 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 PEX3P56589 373 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 CREMQ03060 361 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 TUSC3Q13454 348 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 USP41Q3LFD5 358 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 FUT10Q6P4F1 479 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 CYP26C1Q6V0L0 522 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 C15orf39Q6ZRI6 1047 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 BMP8AQ7Z5Y6 402 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 HDAC7Q8WUI4 952 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 FBXL18Q96ME1 805 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 NTPCRQ9BSD7 190 aaKnown RBP14.85□□□□□ -0.03
HMGN1-211ENST00000471260 APOL5Q9BWW9 433 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 KCNH6Q9H252 994 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 SNTG2Q9NY99 539 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 KLK14Q9P0G3 267 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 ADAM28Q9UKQ2 775 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 TNFSF13BQ9Y275 285 aa14.85□□□□□ -0.03
HMGN1-211ENST00000471260 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 CCDC169A6NNP5 214 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 PP2D1A8MPX8 630 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 HIP1RO75146 1068 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 RECQL4O94761 1208 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 ZXDAP98168 799 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-211ENST00000471260 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
HMGN1-211ENST00000471260 DAW1Q8N136 415 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 SYT2Q8N9I0 419 aaPredicted RBP14.84□□□□□ -0.03
HMGN1-211ENST00000471260 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 RHOBTB2Q9BYZ6 727 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 POMKQ9H5K3 350 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 KMT5AQ9NQR1 393 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 FNIP2Q9P278 1114 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 ARHGAP28Q9P2N2 729 aa14.84□□□□□ -0.03
HMGN1-211ENST00000471260 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 C2CD2LO14523 706 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 PTGESO14684 152 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 TEX28O15482 410 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 TADA2AO75478 443 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 GLUD1P00367 558 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 LIG1P18858 919 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 PDCP20941 246 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
HMGN1-211ENST00000471260 CUL4AQ13619 759 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 NT5DC1Q5TFE4 455 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 TRIM67Q6ZTA4 783 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 TAS1R1Q7RTX1 841 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 GPR149Q86SP6 731 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 CMASQ8NFW8 434 aaPredicted RBP14.83□□□□□ -0.04
HMGN1-211ENST00000471260 SPIRE2Q8WWL2 714 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 CDK5RAP3Q96JB5 506 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 ACO2Q99798 780 aaKnown RBP14.83□□□□□ -0.04
HMGN1-211ENST00000471260 KIFC3Q9BVG8 833 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 MRPL4Q9BYD3 311 aaKnown RBP14.83□□□□□ -0.04
HMGN1-211ENST00000471260 GPR62Q9BZJ7 368 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 RAPGEFL1Q9UHV5 662 aa14.83□□□□□ -0.04
HMGN1-211ENST00000471260 SF3B1O75533 1304 aaKnown RBP eCLIP14.83□□□□□ -0.044e-6■□□□□ 8.6
HMGN1-211ENST00000471260 EDN1P05305 212 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 PLA2G5P39877 138 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 SMTNP53814 917 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 SLC12A3P55017 1021 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 SIGLEC14Q08ET2 396 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 MAPK7Q13164 816 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 NAB2Q15742 525 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 EEF1DP3Q658K8 133 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 ZDHHC14Q8IZN3 488 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 C12orf76Q8N812 135 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-211ENST00000471260 FAM122AQ96E09 287 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 PNMA5Q96PV4 448 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 RUSC1Q9BVN2 902 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 PLEKHA4Q9H4M7 779 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 POLD4Q9HCU8 107 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 PTPRHQ9HD43 1115 aa14.82□□□□□ -0.04
HMGN1-211ENST00000471260 TOPORSQ9NS56 1045 aaPredicted RBP14.82□□□□□ -0.04
HMGN1-211ENST00000471260 H0YCG3 227 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 TMEM189-UBE2V1I3L0A0 370 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 PAPLNO95428 1278 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 BRD1O95696 1058 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 PLS3P13797 630 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 SCP2P22307 547 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 GRM5P41594 1212 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 YARSP54577 528 aaKnown RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 ZRSR1Q15695 479 aaKnown RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 TMEM119Q4V9L6 283 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 PDXDC1Q6P996 788 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 TMC5Q6UXY8 1006 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 TDRD5Q8NAT2 981 aaKnown RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 KCNN1Q92952 543 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 CALML4Q96GE6 196 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms