RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 WDR5P61964 334 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ZBED6P86452 979 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 SP4Q02446 784 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 STRN3Q13033 797 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 PTK7Q13308 1070 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 KYAT1Q16773 422 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 TSR1Q2NL82 804 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 MTERF2Q49AM1 385 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ARMCX5Q6P1M9 558 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 ZBTB8OSQ8IWT0 167 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 FAM186BQ8IYM0 893 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 XXYLT1Q8NBI6 393 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 CACTINQ8WUQ7 758 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 DNAJC7Q99615 494 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 TTYH3Q9C0H2 523 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 KCNH6Q9H252 994 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 VPS16Q9H269 839 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 BCAS3Q9H6U6 928 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 CERS4Q9HA82 394 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 GTF2IRD1Q9UHL9 959 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 SIK3Q9Y2K2 1263 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
PTPRE-207ENST00000471218 LUC7L2Q9Y383 392 aaKnown RBP9.97□□□□□ -0.81
PTPRE-207ENST00000471218 CCDC169A6NNP5 214 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 PI4K2BG5E9Z4 385 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 H3BRB1 525 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 KIF2AO00139 706 aaPredicted RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TEX33O43247 280 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 AKAP3O75969 853 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 LDHAP00338 332 aaKnown RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 AMHP03971 560 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 GYPCP04921 128 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 KRT13P13646 458 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 CLCN1P35523 988 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 CCZ1BP86790 482 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 CETN1Q12798 172 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 MEA1Q16626 185 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 FAM187BQ17R55 369 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 HSP90AA4PQ58FG1 418 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 FAM43BQ6ZT52 329 aaPredicted RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TMTC1Q8IUR5 882 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 LINC01465Q8N7H1 131 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 OR8K1Q8NGG5 319 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 SLC35C1Q96A29 364 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 FAM81BQ96LP2 452 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 KCNF1Q9H3M0 494 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 ZNHIT6Q9NWK9 470 aaKnown RBP9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TRPC6Q9Y210 931 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 NRCAMQ92823 1304 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 ARID2Q68CP9 1835 aa9.96□□□□□ -0.82
PTPRE-207ENST00000471218 TCF20Q9UGU0 1960 aaKnown RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 PRR33A8MZF0 331 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 K7ERI5 159 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 RFXAPO00287 272 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 SLC16A4O15374 487 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 EXOC3O60645 756 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 CAND2O75155 1236 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 C22orf31O95567 290 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 GNAT1P11488 350 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 CKBP12277 381 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 GLRA2P23416 452 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 BFSP1Q12934 665 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 SYCP1Q15431 976 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 LEXMQ3ZCV2 418 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 ZC2HC1CQ53FD0 456 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 TMEM63BQ5T3F8 832 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 CYP26C1Q6V0L0 522 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 APBB1IPQ7Z5R6 666 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 ZNF410Q86VK4 478 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 TXLNBQ8N3L3 684 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 BSNDQ8WZ55 320 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 NECAB3Q96P71 396 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 BAG1Q99933 345 aaPredicted RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 GPRC5CQ9NQ84 441 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
PTPRE-207ENST00000471218 HSPBP1Q9NZL4 362 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 CEP72Q9P209 647 aa9.95□□□□□ -0.82
PTPRE-207ENST00000471218 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 GBF1Q92538 1859 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 MBLAC1A4D2B0 266 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 TMEM150BA6NC51 233 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 HAS3O00219 553 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PES1O00541 588 aaKnown RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 ZSCAN12O43309 604 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 TOM1L1O75674 476 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 HOXC8P31273 242 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms