RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 TMEM173Q86WV6 379 aaPredicted RBP13.8□□□□□ -0.2
CCNL1-213ENST00000471044 MRPL43Q8N983 215 aaKnown RBP13.8□□□□□ -0.2
CCNL1-213ENST00000471044 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
CCNL1-213ENST00000471044 TMEM175Q9BSA9 504 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 C2orf40Q9H1Z8 148 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 FZD8Q9H461 694 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 PRMT7Q9NVM4 692 aaPredicted RBP13.8□□□□□ -0.2
CCNL1-213ENST00000471044 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
CCNL1-213ENST00000471044 ZDBF2Q9HCK1 2354 aa13.8□□□□□ -0.2
CCNL1-213ENST00000471044 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 B4GALT5O43286 388 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 POMCP01189 267 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 ALDH2P05091 517 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
CCNL1-213ENST00000471044 GIT2Q14161 759 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 ANKRD54Q6NXT1 300 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 ZBTB8OSQ8IWT0 167 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 VPS52Q8N1B4 723 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-213ENST00000471044 BSNDQ8WZ55 320 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 SNX27Q96L92 541 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 SPSB2Q99619 263 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 TRIM6Q9C030 488 aaPredicted RBP13.79□□□□□ -0.2
CCNL1-213ENST00000471044 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
CCNL1-213ENST00000471044 MIOSQ9NXC5 875 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 SMC3Q9UQE7 1217 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 GIT1Q9Y2X7 761 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
CCNL1-213ENST00000471044 CITO14578 2027 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 CFAP54Q96N23 3096 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 ARL5CA6NH57 179 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 H3BQV1 296 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 NRP1O14786 923 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 DCXO43602 365 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 NPTXRO95502 500 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 CXCL14O95715 111 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 CTSAP10619 480 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 NAMPTP43490 491 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 ATP2C1P98194 919 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-213ENST00000471044 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 IL17AQ16552 155 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-213ENST00000471044 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 CASP10Q92851 521 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
CCNL1-213ENST00000471044 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-213ENST00000471044 HES2Q9Y543 173 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 ZMYM2Q9UBW7 1377 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
CCNL1-213ENST00000471044 E9PMD0 336 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 LCE2BO14633 110 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 N4BP3O15049 544 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 CLASP2O75122 1294 aaKnown RBP13.77□□□□□ -0.21
CCNL1-213ENST00000471044 HOXB8P17481 243 aaPredicted RBP13.77□□□□□ -0.21
CCNL1-213ENST00000471044 MLH1P40692 756 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 DSC1Q08554 894 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 MAPK6Q16659 721 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 SYCE2Q6PIF2 218 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 SUSD6Q92537 303 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 KIFAP3Q92845 792 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 GAD1Q99259 594 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
CCNL1-213ENST00000471044 APOL6Q9BWW8 343 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 NXF3Q9H4D5 531 aaKnown RBP13.77□□□□□ -0.21
CCNL1-213ENST00000471044 DNM3Q9UQ16 869 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 HCFC2Q9Y5Z7 792 aa13.77□□□□□ -0.21
CCNL1-213ENST00000471044 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 ACKR2O00590 384 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 PRKCBP05771 671 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 CDC25AP30304 524 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 CA8P35219 290 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 SCNN1GP51170 649 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 CUL4AQ13619 759 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 HYIQ5T013 277 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
CCNL1-213ENST00000471044 ARL6IP4Q66PJ3 421 aaKnown RBP13.76□□□□□ -0.21
CCNL1-213ENST00000471044 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 LIAT1Q6ZQX7 453 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 GSTCDQ8NEC7 633 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
CCNL1-213ENST00000471044 AUTS2Q8WXX7 1259 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms