RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 PDIA4P13667 645 aaKnown RBP17.23■□□□□ 0.35
HDAC6-218ENST00000470942 DDIT3P35638 169 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 SMAD4Q13485 552 aaKnown RBP17.23■□□□□ 0.35
HDAC6-218ENST00000470942 GIT2Q14161 759 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-218ENST00000470942 ZNF568Q3ZCX4 644 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 RRAGBQ5VZM2 374 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-218ENST00000470942 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 TMEM161BQ8NDZ6 487 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 ZHX3Q9H4I2 956 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
HDAC6-218ENST00000470942 CITO14578 2027 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 H0YCG3 227 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 THP07101 528 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 MAPTP10636 758 aaKnown RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 SSTR3P32745 418 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 OSTNP61366 133 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 COASYQ13057 564 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-218ENST00000470942 PANK2Q9BZ23 570 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 CDT1Q9H211 546 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
HDAC6-218ENST00000470942 CASTOR2A6NHX0 329 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 F8W810 466 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 C2CD2LO14523 706 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 PTGESO14684 152 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 SPTLC2O15270 562 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 SOD2P04179 222 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 MATR3P43243 847 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 TUSC3Q13454 348 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 ANKRD54Q6NXT1 300 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 TMEM184AQ6ZMB5 413 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 TAS1R1Q7RTX1 841 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 HAUS6Q7Z4H7 955 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 CEP120Q8N960 986 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 LINC00301Q8NCQ3 95 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 CASP10Q92851 521 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 BICD1Q96G01 975 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 ZBTB45Q96K62 511 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 APOL5Q9BWW9 433 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 EMILIN2Q9BXX0 1053 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 PARVGQ9HBI0 331 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 PTPRHQ9HD43 1115 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 HCFC2Q9Y5Z7 792 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 IRAK3Q9Y616 596 aa17.21■□□□□ 0.35
HDAC6-218ENST00000470942 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-218ENST00000470942 K7ENM7 598 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 TADA2AO75478 443 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 F13A1P00488 732 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 URODP06132 367 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 MCF2P10911 925 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 GRM5P41594 1212 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 KCNC3Q14003 757 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-218ENST00000470942 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 GJD3Q8N144 294 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 SMRP1Q8NCR6 262 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-218ENST00000470942 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 PRKAG3Q9UGI9 489 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 SSX2IPQ9Y2D8 614 aa17.2■□□□□ 0.34
HDAC6-218ENST00000470942 USP15Q9Y4E8 981 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-218ENST00000470942 TRAK2O60296 914 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 TOM1L1O75674 476 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 PROZP22891 400 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 KLRC2P26717 231 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 STAT6P42226 847 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 GLUD2P49448 558 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 ZNF131P52739 623 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 KLHL5Q96PQ7 755 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 PAAF1Q9BRP4 392 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 CD320Q9NPF0 282 aa17.19■□□□□ 0.34
HDAC6-218ENST00000470942 C5orf42Q9H799 3197 aa17.18■□□□□ 0.34
HDAC6-218ENST00000470942 ABLIM1O14639 778 aa17.18■□□□□ 0.34
HDAC6-218ENST00000470942 CLDN3O15551 220 aa17.18■□□□□ 0.34
HDAC6-218ENST00000470942 PPP6R2O75170 966 aa17.18■□□□□ 0.34
HDAC6-218ENST00000470942 YEATS4O95619 227 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms