RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TMEM132AQ24JP5 1023 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 DEPTORQ8TB45 409 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 BSNDQ8WZ55 320 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 STAMQ92783 540 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 ADPGKQ9BRR6 497 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 CCDC113Q9H0I3 377 aa19.31■□□□□ 0.68
COL7A1-208ENST00000470076 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
COL7A1-208ENST00000470076 SF3B1O75533 1304 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL7A1-208ENST00000470076 TTLL13PA6NNM8 815 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 PAPLNO95428 1278 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
COL7A1-208ENST00000470076 TDGQ13569 410 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 PALB2Q86YC2 1186 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 RIN2Q8WYP3 895 aaPredicted RBP19.3■□□□□ 0.68
COL7A1-208ENST00000470076 B3GALT6Q96L58 329 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 IGSF9Q9P2J2 1179 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 LRWD1Q9UFC0 647 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
COL7A1-208ENST00000470076 TGM5O43548 720 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 RFPL2O75678 378 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 THP07101 528 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 EFNA5P52803 228 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 PDIA5Q14554 519 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 C4orf32Q8N8J7 132 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 SMG7Q92540 1137 aaKnown RBP19.29■□□□□ 0.68
COL7A1-208ENST00000470076 RABGGTAQ92696 567 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 KIFAP3Q92845 792 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 PHOX2BQ99453 314 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 RAB34Q9BZG1 259 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 MFSD1Q9H3U5 465 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 KCNK12Q9HB15 430 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 ZDHHC7Q9NXF8 308 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 SNTG2Q9NY99 539 aa19.29■□□□□ 0.68
COL7A1-208ENST00000470076 CLUHO75153 1309 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 PTGESO14684 152 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 GALR2O43603 387 aaPredicted RBP19.28■□□□□ 0.68
COL7A1-208ENST00000470076 RECQL4O94761 1208 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 SPATA31D3P0C874 917 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 U2AF2P26368 475 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL7A1-208ENST00000470076 DCAF4L1Q3SXM0 396 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 ASTLQ6HA08 431 aaPredicted RBP19.28■□□□□ 0.68
COL7A1-208ENST00000470076 LILRA6Q6PI73 481 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 SPATA31D4Q6ZUB0 917 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 ZNF707Q96C28 371 aaPredicted RBP19.28■□□□□ 0.68
COL7A1-208ENST00000470076 PAAF1Q9BRP4 392 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 BHMT2Q9H2M3 363 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 DUSP12Q9UNI6 340 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 KIAA1024Q9UPX6 916 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 USP34Q70CQ2 3546 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 ZFHX2Q9C0A1 2572 aaPredicted RBP19.28■□□□□ 0.68
COL7A1-208ENST00000470076 DOCK8Q8NF50 2099 aa19.28■□□□□ 0.68
COL7A1-208ENST00000470076 CASTOR2A6NHX0 329 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 N4BP1O75113 896 aaKnown RBP19.27■□□□□ 0.68
COL7A1-208ENST00000470076 MYBP10242 640 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 LIG1P18858 919 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
COL7A1-208ENST00000470076 CLCN5P51795 746 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 ELAVL2Q12926 359 aaKnown RBP19.27■□□□□ 0.68
COL7A1-208ENST00000470076 ECM1Q16610 540 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 RTP2Q5QGT7 225 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 GLYCTKQ8IVS8 523 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 TMEM105Q8N8V8 129 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 IGSF22Q8N9C0 903 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 KIF2CQ99661 725 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 TTPALQ9BTX7 342 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 NT5C3AQ9H0P0 336 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 CACNG4Q9UBN1 327 aa19.27■□□□□ 0.68
COL7A1-208ENST00000470076 KIF4AO95239 1232 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 EDN1P05305 212 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 RPL17P18621 184 aaKnown RBP19.26■□□□□ 0.67
COL7A1-208ENST00000470076 PTGDRQ13258 359 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 NBR1Q14596 966 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 NAB2Q15742 525 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 FAM171A1Q5VUB5 890 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 EEF1DP3Q658K8 133 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 PDXDC1Q6P996 788 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 PRSS55Q6UWB4 352 aaPredicted RBP19.26■□□□□ 0.67
COL7A1-208ENST00000470076 APBB1IPQ7Z5R6 666 aaPredicted RBP19.26■□□□□ 0.67
COL7A1-208ENST00000470076 SNX29Q8TEQ0 813 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 HASPINQ8TF76 798 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 PIK3R5Q8WYR1 880 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 ATOH1Q92858 354 aaPredicted RBP19.26■□□□□ 0.67
COL7A1-208ENST00000470076 KIFC3Q9BVG8 833 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 PRKD2Q9BZL6 878 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
COL7A1-208ENST00000470076 EPS15L1Q9UBC2 864 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 USP20Q9Y2K6 914 aa19.26■□□□□ 0.67
COL7A1-208ENST00000470076 K7ERI5 159 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 LAD1O00515 517 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 ZMYND10O75800 440 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 TOB1P50616 345 aaPredicted RBP19.25■□□□□ 0.67
COL7A1-208ENST00000470076 ATF7IP2Q5U623 682 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 NXPE3Q969Y0 559 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 POLD4Q9HCU8 107 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 FAM86C1Q9NVL1 165 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL7A1-208ENST00000470076 GDAQ9Y2T3 454 aa19.25■□□□□ 0.67
COL7A1-208ENST00000470076 TRIP11Q15643 1979 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms