RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 REEP2Q9BRK0 252 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 ST6GALNAC4Q9H4F1 302 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 PRDM12Q9H4Q4 367 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 RSAD1Q9HA92 442 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 CHD7Q9P2D1 2997 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 PCDHA7Q9UN72 937 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 TNFSF13BQ9Y275 285 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 ZDHHC9Q9Y397 364 aa10.02□□□□□ -0.81
FN1-216ENST00000469569 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 A0A1W2PQD8 194 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 IGFBP4P22692 258 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 NCKAP1LP55160 1127 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 GPM6BQ13491 265 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 HAUS6Q7Z4H7 955 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 TMEM161BQ8NDZ6 487 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 BSNDQ8WZ55 320 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 ZNF558Q96NG5 402 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 ACO2Q99798 780 aaKnown RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 TCHPQ9BT92 498 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 OLFML3Q9NRN5 406 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 TOPORSQ9NS56 1045 aaPredicted RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 IPPQ9Y573 584 aa10.01□□□□□ -0.81
FN1-216ENST00000469569 MRPL42Q9Y6G3 142 aaKnown RBP10.01□□□□□ -0.81
FN1-216ENST00000469569 SFI1A8K8P3 1242 aa10□□□□□ -0.81
FN1-216ENST00000469569 SLC16A4O15374 487 aa10□□□□□ -0.81
FN1-216ENST00000469569 POLR2DO15514 142 aaKnown RBP10□□□□□ -0.81
FN1-216ENST00000469569 CLDN3O15551 220 aa10□□□□□ -0.81
FN1-216ENST00000469569 OFD1O75665 1012 aa10□□□□□ -0.81
FN1-216ENST00000469569 TOM1L1O75674 476 aa10□□□□□ -0.81
FN1-216ENST00000469569 ALDH2P05091 517 aa10□□□□□ -0.81
FN1-216ENST00000469569 SLFN14P0C7P3 912 aa10□□□□□ -0.81
FN1-216ENST00000469569 MCF2P10911 925 aa10□□□□□ -0.81
FN1-216ENST00000469569 FGFR1P11362 822 aa10□□□□□ -0.81
FN1-216ENST00000469569 ATF7P17544 494 aaPredicted RBP10□□□□□ -0.81
FN1-216ENST00000469569 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
FN1-216ENST00000469569 GTF2BQ00403 316 aa10□□□□□ -0.81
FN1-216ENST00000469569 POU5F1Q01860 360 aaKnown RBP10□□□□□ -0.81
FN1-216ENST00000469569 PLCB3Q01970 1234 aa10□□□□□ -0.81
FN1-216ENST00000469569 RAD51AP2Q09MP3 1159 aa10□□□□□ -0.81
FN1-216ENST00000469569 POSTNQ15063 836 aa10□□□□□ -0.81
FN1-216ENST00000469569 PAN2Q504Q3 1202 aaKnown RBP10□□□□□ -0.81
FN1-216ENST00000469569 CLLU1OSQ5K130 101 aa10□□□□□ -0.81
FN1-216ENST00000469569 UBXN11Q5T124 520 aa10□□□□□ -0.81
FN1-216ENST00000469569 SLFN12LQ6IEE8 588 aa10□□□□□ -0.81
FN1-216ENST00000469569 SHC4Q6S5L8 630 aa10□□□□□ -0.81
FN1-216ENST00000469569 MPZL3Q6UWV2 235 aa10□□□□□ -0.81
FN1-216ENST00000469569 RNF19BQ6ZMZ0 732 aa10□□□□□ -0.81
FN1-216ENST00000469569 PDILTQ8N807 584 aa10□□□□□ -0.81
FN1-216ENST00000469569 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
FN1-216ENST00000469569 HELQQ8TDG4 1101 aa10□□□□□ -0.81
FN1-216ENST00000469569 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
FN1-216ENST00000469569 BICD1Q96G01 975 aa10□□□□□ -0.81
FN1-216ENST00000469569 CPB2Q96IY4 423 aa10□□□□□ -0.81
FN1-216ENST00000469569 RPS6KC1Q96S38 1066 aa10□□□□□ -0.81
FN1-216ENST00000469569 TMEM175Q9BSA9 504 aa10□□□□□ -0.81
FN1-216ENST00000469569 C17orf80Q9BSJ5 609 aa10□□□□□ -0.81
FN1-216ENST00000469569 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
FN1-216ENST00000469569 PANK2Q9BZ23 570 aa10□□□□□ -0.81
FN1-216ENST00000469569 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
FN1-216ENST00000469569 PDZD7Q9H5P4 517 aa10□□□□□ -0.81
FN1-216ENST00000469569 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
FN1-216ENST00000469569 PVALEFA0A1B0GWK0 134 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 ARL5CA6NH57 179 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 MYMKA6NI61 221 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 K7ENM7 598 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 B4GALT5O43286 388 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 LPXNO60711 386 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 NPTXRO95502 500 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 PIGRP01833 764 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 IDEP14735 1019 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 LIG1P18858 919 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 QPCTQ16769 361 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 TUSC1Q2TAM9 212 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 HERC4Q5GLZ8 1057 aaPredicted RBP9.99□□□□□ -0.81
FN1-216ENST00000469569 NT5DC1Q5TFE4 455 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 KCNT2Q6UVM3 1135 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 AGMOQ6ZNB7 445 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 THNSL1Q8IYQ7 743 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 COLGALT1Q8NBJ5 622 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 SMG8Q8ND04 991 aaKnown RBP9.99□□□□□ -0.81
FN1-216ENST00000469569 DHX58Q96C10 678 aa9.99□□□□□ -0.81
FN1-216ENST00000469569 DNAJC19Q96DA6 116 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms