RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 E2F4Q16254 413 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 CD302Q8IX05 232 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 C18orf8Q96DM3 657 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 IQANK1A0A1B0GTG1 560 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 EXOC1LA0A1B0GW35 172 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 DCAF4L1Q3SXM0 396 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 PLA2G4FQ68DD2 849 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 ITPRIPL1Q6GPH6 555 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 FAF2Q96CS3 445 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 RASGRF2O14827 1237 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 ZMYND10O75800 440 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 PMLP29590 882 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 CHRNA3P32297 505 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 ACOT2P49753 483 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 TERF2Q15554 542 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 SV2CQ496J9 727 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 EXOC4Q96A65 974 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 HDAC11Q96DB2 347 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 PIDD1Q9HB75 910 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 ADORA2BP29275 332 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 BCAR1P56945 870 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 CDKL3Q8IVW4 592 aaPredicted RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 TTC25Q96NG3 672 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 CASQ2O14958 399 aaPredicted RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 KRT37O76014 449 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 DSG3P32926 999 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 CYP2C19P33261 490 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 SERPINB6P35237 376 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 IRX4P78413 519 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 DBN1Q16643 649 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 Q4G0T1 1027 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 KIAA1755Q5JYT7 1200 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 NXNQ6DKJ4 435 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 SPATA2LQ8IUW3 424 aaPredicted RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 TADA2AO75478 443 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 SUN1O94901 812 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 HNRNPH2P55795 449 aaKnown RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 ADCY2Q08462 1091 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 C6orf118Q5T5N4 469 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 AFG1LQ8WV93 481 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 SLC4A9Q96Q91 983 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 LBHD1Q9BQE6 289 aaPredicted RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 TACO1Q9BSH4 297 aaKnown RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 TRIM4Q9C037 500 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 SCAF8Q9UPN6 1271 aaKnown RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 RAD51Q06609 339 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 IQCB1Q15051 598 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 USP49Q70CQ1 688 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 SRRM1Q8IYB3 904 aaKnown RBP16■□□□□ 0.15
LIMS2-213ENST00000469300 VGLL2Q8N8G2 317 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 ARRDC4Q8NCT1 418 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 MED15Q96RN5 788 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
LIMS2-213ENST00000469300 CTSHP09668 335 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 SUPT20HL2P0C7V6 817 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 PAPOLAP51003 745 aaKnown RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 DCP1BQ8IZD4 617 aaKnown RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 C17orf102A2RUQ5 167 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 UCHL3P15374 230 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 ATP1A2P50993 1020 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 ZKSCAN8Q15776 578 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 SLC18A3Q16572 532 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 APOBEC3HQ6NTF7 200 aaKnown RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 NUDT18Q6ZVK8 323 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 ATP6V1E2Q96A05 226 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 RAB3IPQ96QF0 476 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 SPATC1LQ9H0A9 340 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 PRDM5Q9NQX1 630 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 GAKO14976 1311 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 FAM187AA6NFU0 413 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 MYBP10242 640 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 KLC3Q6P597 504 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 ZNF677Q86XU0 584 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 GBP7Q8N8V2 638 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-213ENST00000469300 PDCD2LQ9BRP1 358 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 UNC45AQ9H3U1 944 aa15.99■□□□□ 0.15
LIMS2-213ENST00000469300 MYO1CO00159 1063 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 TTI1O43156 1089 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 PPATQ06203 517 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 EPAS1Q99814 870 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 CYP26A1O43174 497 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 KRT3P12035 628 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 ACADSBP45954 432 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NPEPPSP55786 919 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
LIMS2-213ENST00000469300 SH2D3AQ9BRG2 576 aa15.98■□□□□ 0.15
LIMS2-213ENST00000469300 PDE11AQ9HCR9 933 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms