RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 FAM47CQ5HY64 1035 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 C1orf220Q5T0J3 134 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 EEF1DP3Q658K8 133 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 SMYD5Q6GMV2 418 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ARMCX5Q6P1M9 558 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.9□□□□□ -0.99
NPHP3-204ENST00000469232 FAM228AQ86W67 206 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 GPD1LQ8N335 351 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 NLRP7Q8WX94 980 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 SLC35C1Q96A29 364 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ZBTB45Q96K62 511 aaPredicted RBP8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ERGIC2Q96RQ1 377 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 PPP1R9BQ96SB3 815 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 OSMRQ99650 979 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 TUBGCP2Q9BSJ2 902 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 CDT1Q9H211 546 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ERVK-5Q9HDB9 667 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 CHST12Q9NRB3 414 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 ARMCX3Q9UH62 379 aaPredicted RBP8.9□□□□□ -0.99
NPHP3-204ENST00000469232 CPSF3Q9UKF6 684 aaKnown RBP8.9□□□□□ -0.99
NPHP3-204ENST00000469232 TBX21Q9UL17 535 aa8.9□□□□□ -0.99
NPHP3-204ENST00000469232 KIAA0100Q14667 2235 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 A0A1W2PQC6 194 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 GTPBP10A4D1E9 387 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 CLDN3O15551 220 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 EPB41P11171 864 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 SFPQP23246 707 aaKnown RBP eCLIP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 LPIN1Q14693 890 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 MBTPS1Q14703 1052 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 PSMD6Q15008 389 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 SNRNP35Q16560 246 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 TPD52L1Q16890 204 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 DCAF4L1Q3SXM0 396 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 UBXN11Q5T124 520 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 DPY19L2P1Q6NXN4 242 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 INTS8Q75QN2 995 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 BRSK2Q8IWQ3 736 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 FAM186BQ8IYM0 893 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 ZSWIM2Q8NEG5 633 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 PARD3BQ8TEW8 1205 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 NOC4LQ9BVI4 516 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 XPO4Q9C0E2 1151 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 IFNKQ9P0W0 207 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 AGO2Q9UKV8 859 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 NOC2LQ9Y3T9 749 aaKnown RBP8.89□□□□□ -0.99
NPHP3-204ENST00000469232 ITIH6Q6UXX5 1313 aa8.89□□□□□ -0.99
NPHP3-204ENST00000469232 P4HA2O15460 535 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 MEFVO15553 781 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CBFA2T2O43439 604 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 EXOC3O60645 756 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ZNF623O75123 536 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CSDE1O75534 798 aaKnown RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 PARNO95453 639 aaKnown RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ADCY5O95622 1261 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 GTF2H1P32780 548 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CYP2J2P51589 502 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 PRSS12P56730 875 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 UBASH3AP57075 661 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CHMP4BP1P59074 171 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CYP24A1Q07973 514 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 TMEM62Q0P6H9 643 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 FAAP100Q0VG06 881 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 BFSP1Q12934 665 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 BFSP2Q13515 415 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 VWA3BQ502W6 1294 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 XKR4Q5GH76 650 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ZNF618Q5T7W0 954 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 NOTUMQ6P988 496 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 C15orf39Q6ZRI6 1047 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CBWD2Q8IUF1 395 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 CCDC155Q8N6L0 562 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ANKRD20A12PQ8NF67 263 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 DIS3LQ8TF46 1054 aaKnown RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 POMGNT1Q8WZA1 660 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 EEF2KMTQ96G04 330 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ZNF668Q96K58 619 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 MSTO1Q9BUK6 570 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 OSBPL7Q9BZF2 842 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 NDST4Q9H3R1 872 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 C11orf49Q9H6J7 331 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 AGO3Q9H9G7 860 aaKnown RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 MAGEC2Q9UBF1 373 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-204ENST00000469232 FRMD4BQ9Y2L6 1034 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 COQ4Q9Y3A0 265 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 TANC1Q9C0D5 1861 aa8.88□□□□□ -0.99
NPHP3-204ENST00000469232 ZNF233A6NK53 670 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 M0QZ92 97 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 TEX33O43247 280 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 CXCL10P02778 98 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 CLTAP09496 248 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 SELPP16109 830 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
NPHP3-204ENST00000469232 THPOP40225 353 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 GRM5P41594 1212 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 TLE2Q04725 743 aa8.87□□□□□ -0.99
NPHP3-204ENST00000469232 TBX2Q13207 712 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms