RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 RPS6KC1Q96S38 1066 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CBWD1Q9BRT8 395 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 FAM213AQ9BRX8 229 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 APOL6Q9BWW8 343 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 WNT8AQ9H1J5 351 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CDT1Q9H211 546 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 MTIF3Q9H2K0 278 aaKnown RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 SEMA6BQ9H3T3 888 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 RPF1Q9H9Y2 349 aaKnown RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 ERVK-5Q9HDB9 667 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 TOPORSQ9NS56 1045 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-216ENST00000468949 C1orf112Q9NSG2 853 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 USP20Q9Y2K6 914 aa8.85□□□□□ -0.99
HDAC6-216ENST00000468949 A0A1B0GUA9 196 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ZNF233A6NK53 670 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ZBBXA8MT70 800 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 TISP43B9A030 160 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ANKRD63C9JTQ0 380 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 TGFB1I1O43294 461 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 EXTL3O43909 919 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 NBNO60934 754 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 EFCAB14O75071 495 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 CSF2RAP15509 400 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 MTIF2P46199 727 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 EPHB4P54760 987 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 OSTNP61366 133 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 IKBKEQ14164 716 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 SNRNP35Q16560 246 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 NFIL3Q16649 462 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ZCWPW2Q504Y3 356 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PLEKHG4Q58EX7 1191 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 DCAF17Q5H9S7 520 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 TCERG1LQ5VWI1 586 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 TTI2Q6NXR4 508 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 LUZP1Q86V48 1076 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 C12orf56Q8IXR9 622 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 THNSL1Q8IYQ7 743 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ABI1Q8IZP0 508 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 RDH13Q8NBN7 331 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 DBF4BQ8NFT6 615 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PGBD4Q96DM1 585 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 CNOT6LQ96LI5 555 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 FNBP1Q96RU3 617 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 ADAM2Q99965 735 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 SRRTQ9BXP5 876 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 THAP9Q9H5L6 903 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 AGO3Q9H9G7 860 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 METTL14Q9HCE5 456 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 IL23AQ9NPF7 189 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 FAM105AQ9NUU6 356 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 RBAKQ9NYW8 714 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 R3HCC1Q9Y3T6 440 aaKnown RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 TRIP12Q14669 1992 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-216ENST00000468949 SIP14410 1827 aa8.84□□□□□ -0.99
HDAC6-216ENST00000468949 A0A0B4J269 797 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 GOLGA8IPA6NC78 632 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 GOLGA6L3A6NEY3 463 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 GOLGA8JA6NMD2 632 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 STX10O60499 249 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 SERPINC1P01008 464 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 CXCL10P02778 98 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 AMHP03971 560 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 EDN1P05305 212 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 TPM3P06753 285 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 CLTAP09496 248 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 STAG3L1P0CL83 205 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 ITGA4P13612 1032 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 HOXD13P35453 343 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 GRM5P41594 1212 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 ACOT2P49753 483 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 SMAD3P84022 425 aaKnown RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 MBTPS1Q14703 1052 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 SURF1Q15526 300 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 HSP90AA4PQ58FG1 418 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 EEF1DP3Q658K8 133 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 SLC39A4Q6P5W5 647 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 SLC24A5Q71RS6 500 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 INTS8Q75QN2 995 aaKnown RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 EEF2KMTQ96G04 330 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 ZBTB45Q96K62 511 aaPredicted RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 ACAP3Q96P50 834 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.83□□□□□ -15e-7■■■□□ 15.3
HDAC6-216ENST00000468949 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 EIF2AQ9BY44 585 aaKnown RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 IKZF4Q9H2S9 585 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 NXF3Q9H4D5 531 aaKnown RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 ARMCX3Q9UH62 379 aaPredicted RBP8.83□□□□□ -1
HDAC6-216ENST00000468949 PCDHB2Q9Y5E7 798 aa8.83□□□□□ -1
HDAC6-216ENST00000468949 STYXL1Q9Y6J8 313 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms