RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FHL2Q14192 279 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 GAGE13Q4V321 117 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 IFIT1BQ5T764 474 aaKnown RBP6.6□□□□□ -1.35
LSM5-209ENST00000468872 ANKRD35Q8N283 1001 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 PLA2G15Q8NCC3 412 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 GTPBP4Q9BZE4 634 aaKnown RBP6.6□□□□□ -1.35
LSM5-209ENST00000468872 NMRK2Q9NPI5 230 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 SCOCQ9UIL1 159 aa6.6□□□□□ -1.35
LSM5-209ENST00000468872 UBE2QL1A1L167 161 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 TOX4O94842 621 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 POU2F2P09086 479 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 VSIG10L2P0DP72 767 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 HNRNPLP14866 589 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-209ENST00000468872 HSPA6P17066 643 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-209ENST00000468872 MALLQ13021 153 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 CRHR2Q13324 411 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 TUBA3CQ13748 450 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 ZNF267Q14586 743 aaPredicted RBP6.59□□□□□ -1.35
LSM5-209ENST00000468872 RRP1BQ14684 758 aaKnown RBP6.59□□□□□ -1.35
LSM5-209ENST00000468872 UAP1L1Q3KQV9 507 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 TUBA3EQ6PEY2 450 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 FAM111BQ6SJ93 734 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 BTNL9Q6UXG8 535 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 TMPRSS6Q8IU80 811 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSM5-209ENST00000468872 PPP1R14CQ8TAE6 165 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 FATE1Q969F0 183 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 RUNDC1Q96C34 613 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 IL23AQ9NPF7 189 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
LSM5-209ENST00000468872 DAPK3O43293 454 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 AP1G1O43747 822 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 NRP2O60462 931 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 CAND2O75155 1236 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 OFD1O75665 1012 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 EDNRBP24530 442 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 MCM7P33993 719 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 MGAT5Q09328 741 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 MAP9Q49MG5 647 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 ATAT1Q5SQI0 421 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 FNDC7Q5VTL7 733 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
LSM5-209ENST00000468872 GLB1L2Q8IW92 636 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 GLB1L3Q8NCI6 653 aaPredicted RBP6.58□□□□□ -1.36
LSM5-209ENST00000468872 SLC35G2Q8TBE7 412 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 NRG4Q8WWG1 115 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 HPS3Q969F9 1004 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 TAAR9Q96RI9 348 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 DDX20Q9UHI6 824 aaKnown RBP6.58□□□□□ -1.36
LSM5-209ENST00000468872 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
LSM5-209ENST00000468872 ERC2O15083 957 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 HTRA2O43464 458 aaPredicted RBP6.57□□□□□ -1.36
LSM5-209ENST00000468872 TMEM127O75204 238 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 JUNP05412 331 aaKnown RBP6.57□□□□□ -1.36
LSM5-209ENST00000468872 XPAP23025 273 aaPredicted RBP6.57□□□□□ -1.36
LSM5-209ENST00000468872 WASP42768 502 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 MCAMP43121 646 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 SCNN1GP51170 649 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 SLC16A1P53985 500 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 NRG3P56975 720 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 PPP3CAQ08209 521 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 GRM3Q14832 879 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 MUM1L1Q5H9M0 696 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 KRT40Q6A162 431 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 Q6ZRM9 215 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 TIFAQ96CG3 184 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 TCF25Q9BQ70 676 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 SLITRK6Q9H5Y7 841 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 GREM2Q9H772 168 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 C14orf93Q9H972 538 aaKnown RBP6.57□□□□□ -1.36
LSM5-209ENST00000468872 PARPBPQ9NWS1 579 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 RCAN3Q9UKA8 241 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 IPPQ9Y573 584 aa6.57□□□□□ -1.36
LSM5-209ENST00000468872 A0A1W2PR48 441 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 PDCP20941 246 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 CD69Q07108 199 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 HLTFQ14527 1009 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSM5-209ENST00000468872 GBX1Q14549 363 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
LSM5-209ENST00000468872 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 ARHGAP29Q52LW3 1261 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 SLC4A10Q6U841 1118 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 LMBR1LQ6UX01 489 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 PRR18Q8N4B5 295 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 DIS3LQ8TF46 1054 aaKnown RBP6.56□□□□□ -1.36
LSM5-209ENST00000468872 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 MMRN2Q9H8L6 949 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 ARNT2Q9HBZ2 717 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 PRDM11Q9NQV5 511 aa6.56□□□□□ -1.36
LSM5-209ENST00000468872 LY86O95711 162 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 KIR2DL3P43628 341 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 TGFB2P61812 414 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 GALEQ14376 348 aa6.55□□□□□ -1.36
LSM5-209ENST00000468872 FKBP15Q5T1M5 1219 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms