RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HGSNATQ68CP4 663 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 SV2AQ7L0J3 742 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 C7orf31Q8N865 590 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 LZTFL1Q9NQ48 299 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 TNFSF13BQ9Y275 285 aa20.55■□□□□ 0.88
SMC4-209ENST00000468653 C17orf102A2RUQ5 167 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 GNAT1P11488 350 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 PRKAR2AP13861 404 aaKnown RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 PROZP22891 400 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 STAT1P42224 750 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 KIF11P52732 1056 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 MAPK8IP2Q13387 824 aaPredicted RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 PHLDB3Q6NSJ2 640 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 SRGAP1Q7Z6B7 1085 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 FBXL13Q8NEE6 735 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 PRIMPOLQ96LW4 560 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 MTG1Q9BT17 334 aaPredicted RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 UPF3AQ9H1J1 476 aaKnown RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 PTPRHQ9HD43 1115 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 UBE2TQ9NPD8 197 aaPredicted RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 REXO2Q9Y3B8 237 aaKnown RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 CASP8AP2Q9UKL3 1982 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 GPR25O00155 361 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 ABLIM1O14639 778 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 CLDN10P78369 228 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 HTRA3P83110 453 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 DRAP1Q14919 205 aaPredicted RBP20.54■□□□□ 0.88
SMC4-209ENST00000468653 ARHGAP29Q52LW3 1261 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 HDAC6Q9UBN7 1215 aa20.54■□□□□ 0.88
SMC4-209ENST00000468653 ERLIN2O94905 339 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 CCND3P30281 292 aaPredicted RBP20.53■□□□□ 0.88
SMC4-209ENST00000468653 TNFSF9P41273 254 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 ADAM17P78536 824 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 AMHR2Q16671 573 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 KIZQ2M2Z5 673 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 EEF1DP3Q658K8 133 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 LMBRD2Q68DH5 695 aaPredicted RBP20.53■□□□□ 0.88
SMC4-209ENST00000468653 RUFY4Q6ZNE9 571 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 KIAA1328Q86T90 577 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 CDR2LQ86X02 465 aaPredicted RBP20.53■□□□□ 0.88
SMC4-209ENST00000468653 FMNL3Q8IVF7 1028 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 BRSK2Q8IWQ3 736 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 RAET1EQ8TD07 263 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 ZNF516Q92618 1163 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 SEMA4DQ92854 862 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 XPNPEP3Q9NQH7 507 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 RAB20Q9NX57 234 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 GINS2Q9Y248 185 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 R3HCC1Q9Y3T6 440 aaKnown RBP20.53■□□□□ 0.88
SMC4-209ENST00000468653 BZW2Q9Y6E2 419 aaKnown RBP20.53■□□□□ 0.88
SMC4-209ENST00000468653 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
SMC4-209ENST00000468653 A0A0U1RQJ8 604 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 F8VZ95 297 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 TREHO43280 583 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 FAM189A1O60320 539 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 LRRN2O75325 713 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 FERP16591 822 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 SOX5P35711 763 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 WNT7BP56706 349 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 ETF1P62495 437 aaKnown RBP20.52■□□□□ 0.88
SMC4-209ENST00000468653 TMEM62Q0P6H9 643 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 HIC1Q14526 733 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 ARHGAP44Q17R89 818 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 SYT10Q6XYQ8 523 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 IRF2BP2Q7Z5L9 587 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 ARHGEF19Q8IW93 802 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 THNSL1Q8IYQ7 743 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 KIF18AQ8NI77 898 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 TAS1R2Q8TE23 839 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 ATRIPQ8WXE1 791 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 VTI1AQ96AJ9 217 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 CGRRF1Q99675 332 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 GCOM2Q9BZD3 368 aaPredicted RBP20.52■□□□□ 0.88
SMC4-209ENST00000468653 ADAMTS10Q9H324 1103 aa20.52■□□□□ 0.88
SMC4-209ENST00000468653 GFPT2O94808 682 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 GNRH1P01148 92 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 HMGCRP04035 888 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 ZNF200P98182 395 aaPredicted RBP20.51■□□□□ 0.87
SMC4-209ENST00000468653 CYP27A1Q02318 531 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 BIRC3Q13489 604 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 CXCL17Q6UXB2 119 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 DNAJB3Q8WWF6 145 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 FAM212AQ96EL1 285 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 ERO1AQ96HE7 468 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 CDT1Q9H211 546 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 HAUS4Q9H6D7 363 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.51■□□□□ 0.872e-6■■■■■ 539.2
SMC4-209ENST00000468653 CPSF3Q9UKF6 684 aaKnown RBP20.51■□□□□ 0.87
SMC4-209ENST00000468653 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
SMC4-209ENST00000468653 GNG11P61952 73 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 NKX3-2P78367 333 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 SURF1Q15526 300 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 ASTE1Q2TB18 679 aaPredicted RBP20.51■□□□□ 0.87
SMC4-209ENST00000468653 ZACNQ401N2 412 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 C15orf39Q6ZRI6 1047 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 CPB2Q96IY4 423 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 NT5C1BQ96P26 610 aa20.51■□□□□ 0.87
SMC4-209ENST00000468653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.51■□□□□ 0.877e-7■■□□□ 12.7
SMC4-209ENST00000468653 GPR32O75388 356 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms