RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ACCSQ96QU6 501 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 ALG13Q9NP73 1137 aaKnown RBP21.91■■□□□ 1.1
NPHP4-206ENST00000468253 TOPORSQ9NS56 1045 aaPredicted RBP21.91■■□□□ 1.1
NPHP4-206ENST00000468253 A0A0B4J269 797 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 HNRNPDLO14979 420 aaKnown RBP21.9■■□□□ 1.1
NPHP4-206ENST00000468253 NR1I2O75469 434 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 ZNF202O95125 648 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 AFMP43652 599 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 SCNN1GP51170 649 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 YARSP54577 528 aaKnown RBP21.9■■□□□ 1.1
NPHP4-206ENST00000468253 POU5F1Q01860 360 aaKnown RBP21.9■■□□□ 1.1
NPHP4-206ENST00000468253 EHHADHQ08426 723 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 GRIK3Q13003 919 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 COASYQ13057 564 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 CAMK1Q14012 370 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 NOLC1Q14978 699 aaKnown RBP eCLIP21.9■■□□□ 1.1
NPHP4-206ENST00000468253 POSTNQ15063 836 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 L1TD1Q5T7N2 865 aaKnown RBP21.9■■□□□ 1.1
NPHP4-206ENST00000468253 KANK3Q6NY19 840 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 ZBTB33Q86T24 672 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 POF1BQ8WVV4 589 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 TMEM206Q9H813 350 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 KLK14Q9P0G3 267 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 FAN1Q9Y2M0 1017 aa21.9■■□□□ 1.1
NPHP4-206ENST00000468253 ZC3H11AO75152 810 aaKnown RBP eCLIP21.89■■□□□ 1.09
NPHP4-206ENST00000468253 THP07101 528 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 CLTAP09496 248 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 TIGD5Q53EQ6 642 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 CCDC34Q96HJ3 373 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 IGSF21Q96ID5 467 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 RPS6KC1Q96S38 1066 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 PLEKHA5Q9HAU0 1116 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 TBC1D7Q9P0N9 293 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 GDAQ9Y2T3 454 aa21.89■■□□□ 1.09
NPHP4-206ENST00000468253 PRRC2BQ5JSZ5 2229 aaKnown RBP21.89■■□□□ 1.09
NPHP4-206ENST00000468253 FNDC1Q4ZHG4 1894 aaPredicted RBP21.89■■□□□ 1.09
NPHP4-206ENST00000468253 GCNT3O95395 438 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 DNAJB1P25685 340 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 SLC11A1P49279 550 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 PSMD2Q13200 908 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 CUL4BQ13620 913 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 TMEM169Q96HH4 297 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 TSPAN18Q96SJ8 248 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 HAPLN2Q9GZV7 340 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 GOLPH3LQ9H4A5 285 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 DNAJB4Q9UDY4 337 aa21.88■■□□□ 1.09
NPHP4-206ENST00000468253 PTGESO14684 152 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 NRP1O14786 923 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 OGTO15294 1046 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 EIF3DO15371 548 aaKnown RBP eCLIP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 NCK2O43639 380 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 ADRB2P07550 413 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 KCNE1P15382 129 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 SLC39A4Q6P5W5 647 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 KRBA2Q6ZNG9 492 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 DDX53Q86TM3 631 aaKnown RBP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 FMR1NBQ8N0W7 255 aaPredicted RBP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 ZNF507Q8TCN5 953 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 COLEC11Q9BWP8 271 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 GBP3Q9H0R5 595 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 BLZF1Q9H2G9 400 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 NSUN3Q9H649 340 aaKnown RBP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 NGRNQ9NPE2 291 aaKnown RBP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 ANKFY1Q9P2R3 1169 aa21.87■■□□□ 1.09
NPHP4-206ENST00000468253 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.87■■□□□ 1.09
NPHP4-206ENST00000468253 SMIM28A0A1B0GU29 152 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 ANKRD63C9JTQ0 380 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 B4GALT3O60512 393 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 MYBP10242 640 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 MATR3P43243 847 aaKnown RBP eCLIP21.86■■□□□ 1.09
NPHP4-206ENST00000468253 CASP5P51878 434 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 TUSC3Q13454 348 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 BMS1Q14692 1282 aaKnown RBP21.86■■□□□ 1.09
NPHP4-206ENST00000468253 FAM26FQ5R3K3 315 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 EPM2AIP1Q7L775 607 aaPredicted RBP21.86■■□□□ 1.09
NPHP4-206ENST00000468253 CEP120Q8N960 986 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 ENGASEQ8NFI3 743 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 PPP2R3CQ969Q6 453 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 IPO9Q96P70 1041 aaKnown RBP21.86■■□□□ 1.09
NPHP4-206ENST00000468253 PPP1R10Q96QC0 940 aaKnown RBP21.86■■□□□ 1.09
NPHP4-206ENST00000468253 TLR9Q9NR96 1032 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 COL6A3P12111 3177 aa21.86■■□□□ 1.09
NPHP4-206ENST00000468253 NT5C1B-RDH14C9J2C7 533 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 FSCN2O14926 492 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 KLRC4O43908 158 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 FAM189A1O60320 539 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 GARTP22102 1010 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 PBX3P40426 434 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 SNRPFP62306 86 aaKnown RBP21.85■■□□□ 1.09
NPHP4-206ENST00000468253 KCNA1Q09470 495 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 SNW1Q13573 536 aaKnown RBP21.85■■□□□ 1.09
NPHP4-206ENST00000468253 NAB2Q15742 525 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 SLC10A6Q3KNW5 377 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 CD302Q8IX05 232 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 ELOA2Q8IYF1 753 aaPredicted RBP21.85■■□□□ 1.09
NPHP4-206ENST00000468253 GRAMD1CQ8IYS0 662 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 TMEM87AQ8NBN3 555 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 SNX27Q96L92 541 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 TIGD1Q96MW7 591 aa21.85■■□□□ 1.09
NPHP4-206ENST00000468253 MSTO1Q9BUK6 570 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms