RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PLCD3Q8N3E9 789 aa27.04■■□□□ 1.92
PTCH1-210ENST00000468211 CMASQ8NFW8 434 aaPredicted RBP27.04■■□□□ 1.92
PTCH1-210ENST00000468211 C2orf40Q9H1Z8 148 aa27.04■■□□□ 1.92
PTCH1-210ENST00000468211 BHMT2Q9H2M3 363 aa27.04■■□□□ 1.92
PTCH1-210ENST00000468211 KIAA1024Q9UPX6 916 aa27.04■■□□□ 1.92
PTCH1-210ENST00000468211 PCDHB6Q9Y5E3 794 aa27.04■■□□□ 1.92
PTCH1-210ENST00000468211 CCDC195A0A1B0GUA6 201 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 ACKR2O00590 384 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 N4BP3O15049 544 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 N4BP1O75113 896 aaKnown RBP27.03■■□□□ 1.92
PTCH1-210ENST00000468211 GLUD1P00367 558 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 RPL17P18621 184 aaKnown RBP27.03■■□□□ 1.92
PTCH1-210ENST00000468211 MUTP22033 750 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 MAPK6Q16659 721 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 DEPTORQ8TB45 409 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 LRWD1Q9UFC0 647 aa27.03■■□□□ 1.92
PTCH1-210ENST00000468211 NOL7Q9UMY1 257 aaKnown RBP27.03■■□□□ 1.92
PTCH1-210ENST00000468211 CASTOR2A6NHX0 329 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 RECQL4O94761 1208 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 PTGDRQ13258 359 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 HSP90AA2PQ14568 343 aaPredicted RBP27.02■■□□□ 1.92
PTCH1-210ENST00000468211 NAB2Q15742 525 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 IL17AQ16552 155 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 USP41Q3LFD5 358 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 HAUS3Q68CZ6 603 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 HASPINQ8TF76 798 aa27.02■■□□□ 1.92
PTCH1-210ENST00000468211 RIN2Q8WYP3 895 aaPredicted RBP27.02■■□□□ 1.92
PTCH1-210ENST00000468211 DDX19AQ9NUU7 478 aaKnown RBP27.02■■□□□ 1.92
PTCH1-210ENST00000468211 CACNA1HO95180 2353 aa27.01■■□□□ 1.92
PTCH1-210ENST00000468211 PP2D1A8MPX8 630 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 TADA2AO75478 443 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 PTPN5P54829 565 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 TUSC3Q13454 348 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 TMEM132AQ24JP5 1023 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 RTP2Q5QGT7 225 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 NT5DC1Q5TFE4 455 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 PRSS55Q6UWB4 352 aaPredicted RBP27.01■■□□□ 1.91
PTCH1-210ENST00000468211 OTOP3Q7RTS5 596 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 IGSF22Q8N9C0 903 aa27.01■■□□□ 1.91
PTCH1-210ENST00000468211 ZNF707Q96C28 371 aaPredicted RBP27.01■■□□□ 1.91
PTCH1-210ENST00000468211 ACSF2Q96CM8 615 aaPredicted RBP27.01■■□□□ 1.91
PTCH1-210ENST00000468211 TGM5O43548 720 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 KIF4AO95239 1232 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 PDIA5Q14554 519 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 LILRA6Q6PI73 481 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 FNIP2Q9P278 1114 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 GDAQ9Y2T3 454 aa27■■□□□ 1.91
PTCH1-210ENST00000468211 E9PMD0 336 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 IGFBP6P24592 240 aaPredicted RBP26.99■■□□□ 1.91
PTCH1-210ENST00000468211 CDC25AP30304 524 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 PPP2R5AQ15172 486 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 GPR65Q8IYL9 337 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 SNX29Q8TEQ0 813 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 PRRX2Q99811 253 aa26.99■■□□□ 1.91
PTCH1-210ENST00000468211 WDR6Q9NNW5 1121 aaKnown RBP26.99■■□□□ 1.91
PTCH1-210ENST00000468211 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.99■■□□□ 1.91
PTCH1-210ENST00000468211 PAPLNO95428 1278 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 THP07101 528 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 DAW1Q8N136 415 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 TMEM105Q8N8V8 129 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 SMG7Q92540 1137 aaKnown RBP26.98■■□□□ 1.91
PTCH1-210ENST00000468211 KIFAP3Q92845 792 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 IFT74Q96LB3 600 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 ADPGKQ9BRR6 497 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 KCNK12Q9HB15 430 aa26.98■■□□□ 1.91
PTCH1-210ENST00000468211 CLUHO75153 1309 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 SF3B1O75533 1304 aaKnown RBP eCLIP26.97■■□□□ 1.914e-7■■■■■ 133.7
PTCH1-210ENST00000468211 MYH11P35749 1972 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 FAM171A1Q5VUB5 890 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 KCNK18Q7Z418 384 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 HDAC7Q8WUI4 952 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 RHOBTB2Q9BYZ6 727 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 NT5C3AQ9H0P0 336 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 FAM86C1Q9NVL1 165 aa26.97■■□□□ 1.91
PTCH1-210ENST00000468211 USP34Q70CQ2 3546 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 EFNA5P52803 228 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 ATF7IP2Q5U623 682 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 CEP57Q86XR8 500 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 RSAD2Q8WXG1 361 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 MYADMQ96S97 322 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 CLSTN3Q9BQT9 956 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 MMTAG2Q9BU76 263 aaKnown RBP26.96■■□□□ 1.91
PTCH1-210ENST00000468211 RUSC1Q9BVN2 902 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 PLEKHA4Q9H4M7 779 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.96■■□□□ 1.91
PTCH1-210ENST00000468211 DPP7Q9UHL4 492 aa26.96■■□□□ 1.91
PTCH1-210ENST00000468211 C1RP00736 705 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 PEX3P56589 373 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 TDGQ13569 410 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 DCAF4L1Q3SXM0 396 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 GLRA4Q5JXX5 417 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 ELMSAN1Q6PJG2 1045 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 CYP26C1Q6V0L0 522 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 LNX1Q8TBB1 728 aaPredicted RBP26.95■■□□□ 1.9
PTCH1-210ENST00000468211 TTPALQ9BTX7 342 aa26.95■■□□□ 1.9
PTCH1-210ENST00000468211 K7ERI5 159 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 ADAM12O43184 909 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 GBP2P32456 591 aaPredicted RBP26.94■■□□□ 1.9
PTCH1-210ENST00000468211 NPTX2P47972 431 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 MAPK7Q13164 816 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms