RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 HOXB13Q92826 284 aaPredicted RBP6.13□□□□□ -1.43
RBM39-226ENST00000468086 FAM193BQ96PV7 902 aaPredicted RBP6.13□□□□□ -1.43
RBM39-226ENST00000468086 PRRX2Q99811 253 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 SLC46A2Q9BY10 475 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 MMRN2Q9H8L6 949 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 SPON1Q9HCB6 807 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 EIF2B4Q9UI10 523 aaKnown RBP6.13□□□□□ -1.43
RBM39-226ENST00000468086 FZD1Q9UP38 647 aa6.13□□□□□ -1.43
RBM39-226ENST00000468086 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 SNRPA1P09661 255 aaKnown RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 CANXP27824 592 aaKnown RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 SREBF1P36956 1147 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 PER3P56645 1201 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 CLRN1P58418 232 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 KRT85P78386 507 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 TRMT2AQ8IZ69 625 aaKnown RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 SYNE4Q8N205 404 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 CPT1CQ8TCG5 803 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 CASKIN2Q8WXE0 1202 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 TFAP2CQ92754 450 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 CEP95Q96GE4 821 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 UHRF1Q96T88 793 aaPredicted RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 SLC2A4RGQ9NR83 387 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 GPRC5BQ9NZH0 403 aa6.12□□□□□ -1.43
RBM39-226ENST00000468086 REXO2Q9Y3B8 237 aaKnown RBP6.12□□□□□ -1.43
RBM39-226ENST00000468086 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 ADCY6O43306 1168 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 FAM20BO75063 409 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 ALOX15P16050 662 aaPredicted RBP6.11□□□□□ -1.43
RBM39-226ENST00000468086 WASP42768 502 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 AMPD3Q01432 767 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 NOMO1Q15155 1222 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 RRP12Q5JTH9 1297 aaKnown RBP6.11□□□□□ -1.43
RBM39-226ENST00000468086 SYDE2Q5VT97 1194 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 ANKS6Q68DC2 871 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 RHOUQ7L0Q8 258 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 ULK2Q8IYT8 1036 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 PQLC1Q8N2U9 271 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 OR10H5Q8NGA6 315 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.11□□□□□ -1.43
RBM39-226ENST00000468086 NRDE2Q9H7Z3 1164 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 LANCL2Q9NS86 450 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 POGKQ9P215 609 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 PCDHGA2Q9Y5H1 932 aa6.11□□□□□ -1.43
RBM39-226ENST00000468086 TEX33O43247 280 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 ITGB1P05556 798 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 OSMP13725 252 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 APOBEC3AP31941 199 aaPredicted RBP6.1□□□□□ -1.43
RBM39-226ENST00000468086 GUCY1A2P33402 732 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 GUCY2FP51841 1108 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 DPTQ07507 201 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 CSRP2Q16527 193 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 GDF7Q7Z4P5 450 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 MRGPREQ86SM8 312 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 CBARPQ8N350 705 aaPredicted RBP6.1□□□□□ -1.43
RBM39-226ENST00000468086 C1orf162Q8NEQ5 155 aaPredicted RBP6.1□□□□□ -1.43
RBM39-226ENST00000468086 ZCRB1Q8TBF4 217 aaKnown RBP6.1□□□□□ -1.43
RBM39-226ENST00000468086 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 TRIM8Q9BZR9 551 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 TMEM140Q9NV12 185 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 CHST2Q9Y4C5 530 aa6.1□□□□□ -1.43
RBM39-226ENST00000468086 CXorf49A8MYA2 514 aaPredicted RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 AHRRA9YTQ3 701 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 RNASET2O00584 256 aaKnown RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 SPATA31D3P0C874 917 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 LAG3P18627 525 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 NHLH2Q02577 135 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 ATXN7L2Q5T6C5 722 aaPredicted RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 OTUD7BQ6GQQ9 843 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 PGM2L1Q6PCE3 622 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 SPATA31D4Q6ZUB0 917 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 DRC7Q8IY82 874 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 REPS2Q8NFH8 660 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 MYEOVQ96EZ4 313 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 FAXDC2Q96IV6 333 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 BRINP2Q9C0B6 783 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 SENP6Q9GZR1 1112 aaPredicted RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 MKS1Q9NXB0 559 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 SAP30BPQ9UHR5 308 aaKnown RBP6.09□□□□□ -1.43
RBM39-226ENST00000468086 MRFAP1Q9Y605 127 aa6.09□□□□□ -1.43
RBM39-226ENST00000468086 WDR33Q9C0J8 1336 aaKnown RBP6.08□□□□□ -1.44
RBM39-226ENST00000468086 KLHL33A6NCF5 533 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 ZSCAN20P17040 1043 aaPredicted RBP6.08□□□□□ -1.44
RBM39-226ENST00000468086 INHBCP55103 352 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 CLUL1Q15846 466 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 LY6G5CQ5SRR4 150 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 SYT12Q8IV01 421 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 PRPF38AQ8NAV1 312 aaKnown RBP6.08□□□□□ -1.44
RBM39-226ENST00000468086 SLC35B2Q8TB61 432 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 LARP4BQ92615 738 aaKnown RBP6.08□□□□□ -1.44
RBM39-226ENST00000468086 DMRT3Q9NQL9 472 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 TRPM5Q9NZQ8 1165 aa6.08□□□□□ -1.44
RBM39-226ENST00000468086 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms