RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-215ENST00000468018 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 ALKAL1Q6UXT8 129 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 ZPBP2Q6X784 338 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 TMC7Q7Z402 723 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 RBM23Q86U06 439 aaKnown RBP16.65■□□□□ 0.26
ATG4B-215ENST00000468018 CEP120Q8N960 986 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-215ENST00000468018 IGFLR1Q9H665 355 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 PARP2Q9UGN5 583 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 C5orf42Q9H799 3197 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 H0YCG3 227 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 PIGRP01833 764 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 MCF2P10911 925 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 TXLNAP40222 546 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 GRM5P41594 1212 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
ATG4B-215ENST00000468018 TUSC3Q13454 348 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
ATG4B-215ENST00000468018 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 RRAGBQ5VZM2 374 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 PTCRAQ6ISU1 281 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-215ENST00000468018 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 SMRP1Q8NCR6 262 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 NECAB3Q96P71 396 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-215ENST00000468018 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 HERC2P3Q9BVR0 1158 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 TFIP11Q9UBB9 837 aaKnown RBP16.64■□□□□ 0.25
ATG4B-215ENST00000468018 ZDHHC9Q9Y397 364 aa16.64■□□□□ 0.25
ATG4B-215ENST00000468018 FRMD3A2A2Y4 597 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 F8W810 466 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 MEFVO15553 781 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 MBTPS2O43462 519 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 TRAK2O60296 914 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 TOM1L1O75674 476 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 FAM13AO94988 1023 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 SOD2P04179 222 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 GTF2BQ00403 316 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 SMAD2Q15796 467 aaKnown RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 E2F4Q16254 413 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 ZNF568Q3ZCX4 644 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 SHC4Q6S5L8 630 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 HAUS6Q7Z4H7 955 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 APBB1IPQ7Z5R6 666 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 ZBTB45Q96K62 511 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 PPP1R10Q96QC0 940 aaKnown RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 HAPLN2Q9GZV7 340 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 BARX2Q9UMQ3 279 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-215ENST00000468018 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
ATG4B-215ENST00000468018 MYMKA6NI61 221 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 CLASP2O75122 1294 aaKnown RBP16.62■□□□□ 0.25
ATG4B-215ENST00000468018 PPP1R37O75864 691 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 THP07101 528 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 OR1G1P47890 313 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 NDUFV1P49821 464 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 MCL1Q07820 350 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 STRN3Q13033 797 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-215ENST00000468018 GPR65Q8IYL9 337 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 MYCT1Q8N699 235 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-215ENST00000468018 DDX12PQ92771 950 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 PAAF1Q9BRP4 392 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 STRA6Q9BX79 667 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 CHST7Q9NS84 486 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 CD207Q9UJ71 328 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
ATG4B-215ENST00000468018 TNFRSF10AO00220 468 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 FAM189A1O60320 539 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 CUTAO60888 179 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 CXCL14O95715 111 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
ATG4B-215ENST00000468018 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATG4B-215ENST00000468018 KIAA0319Q5VV43 1072 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 TAS1R1Q7RTX1 841 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 MAP4K3Q8IVH8 894 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 KCNG4Q8TDN1 519 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 AUTS2Q8WXX7 1259 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 SNX27Q96L92 541 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 S1PR5Q9H228 398 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
ATG4B-215ENST00000468018 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms