RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ANKRD63C9JTQ0 380 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 HNRNPDLO14979 420 aaKnown RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 GRM6O15303 877 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 RECQL4O94761 1208 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 DDHD2O94830 711 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 PRPF6O94906 941 aaKnown RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 ITGB1P05556 798 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 GALTP07902 379 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 FOSL2P15408 326 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 IGFBP4P22692 258 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 MLH1P40692 756 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 ALDH7A1P49419 539 aaKnown RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 BCAR1P56945 870 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 FAM160A1Q05DH4 1040 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 NOLC1Q14978 699 aaKnown RBP eCLIP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 POSTNQ15063 836 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 KYAT1Q16773 422 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 FAM26FQ5R3K3 315 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 ALKAL1Q6UXT8 129 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 STXBP4Q6ZWJ1 553 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 EPM2AIP1Q7L775 607 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 ZNF507Q8TCN5 953 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 GDPD5Q8WTR4 605 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 CCDC34Q96HJ3 373 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 TIGD1Q96MW7 591 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 FAM193BQ96PV7 902 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-206ENST00000467681 SPG21Q9NZD8 308 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 MTCH2Q9Y6C9 303 aa14.89□□□□□ -0.03
SSBP1-206ENST00000467681 FGF18O76093 207 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 CLTAP09496 248 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 HOXD13P35453 343 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 MATR3P43243 847 aaKnown RBP eCLIP14.88□□□□□ -0.03
SSBP1-206ENST00000467681 SCNN1GP51170 649 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 OSTNP61366 133 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 PLCB3Q01970 1234 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 DSC1Q08554 894 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 DPYDQ12882 1025 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 PSMD2Q13200 908 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 KMT5BQ4FZB7 885 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 COLGALT2Q8IYK4 626 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 SYCP3Q8IZU3 236 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 CEP120Q8N960 986 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 GLIS3Q8NEA6 775 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 TMEM175Q9BSA9 504 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 LMAN2LQ9H0V9 348 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 CXCL16Q9H2A7 254 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 TMEM206Q9H813 350 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 ALG13Q9NP73 1137 aaKnown RBP14.88□□□□□ -0.03
SSBP1-206ENST00000467681 ANKFY1Q9P2R3 1169 aa14.88□□□□□ -0.03
SSBP1-206ENST00000467681 PTGESO14684 152 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 OGTO15294 1046 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 EIF3DO15371 548 aaKnown RBP eCLIP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 B4GALT3O60512 393 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 PRPF40AO75400 957 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 RPN1P04843 607 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 HARSP12081 509 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 ADSSP30520 456 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 PPM1AP35813 382 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 SLC11A1P49279 550 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 YARSP54577 528 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 KRT17Q04695 432 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 UBE3AQ05086 875 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 CAMK1Q14012 370 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 PTPROQ16827 1216 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 SLC10A6Q3KNW5 377 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 ELOA2Q8IYF1 753 aaPredicted RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 SLC39A11Q8N1S5 342 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 MRPL38Q96DV4 380 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 RPS6KC1Q96S38 1066 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 IKZF4Q9H2S9 585 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 PLEKHA5Q9HAU0 1116 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 DNAJB4Q9UDY4 337 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 PUF60Q9UHX1 559 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 FAN1Q9Y2M0 1017 aa14.87□□□□□ -0.03
SSBP1-206ENST00000467681 LAMA2P24043 3122 aaKnown RBP14.87□□□□□ -0.03
SSBP1-206ENST00000467681 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 SMIM28A0A1B0GU29 152 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 TISP43B9A030 160 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 NT5C1B-RDH14C9J2C7 533 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 MEFVO15553 781 aaPredicted RBP14.86□□□□□ -0.03
SSBP1-206ENST00000467681 FAM189A1O60320 539 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 ZC3H11AO75152 810 aaKnown RBP eCLIP14.86□□□□□ -0.03
SSBP1-206ENST00000467681 NR1I2O75469 434 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 THP07101 528 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 KCNE1P15382 129 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 DNAJB1P25685 340 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 PBX3P40426 434 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 UBE2HP62256 183 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 GRIK3Q13003 919 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 STK4Q13043 487 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 SEZ6Q53EL9 994 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 POF1BQ8WVV4 589 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 IGSF21Q96ID5 467 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 SLC39A2Q9NP94 309 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms