RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 OTOP3Q7RTS5 596 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 METTL13Q8N6R0 699 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-203ENST00000467514 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
PRPF3-203ENST00000467514 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
PRPF3-203ENST00000467514 NFASCO94856 1347 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 PVALEFA0A1B0GWK0 134 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 E9PMD0 336 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 CLASP2O75122 1294 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 KRT37O76014 449 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 CCNE2O96020 404 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 PLA2G4BP0C869 781 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 ALDH7A1P49419 539 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 SLC12A3P55017 1021 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 ACTR2P61160 394 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 AMPD3Q01432 767 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 PLPPR4Q7Z2D5 763 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 TRMT1LQ7Z2T5 733 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 DNAJC19Q96DA6 116 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 ELAC1Q9H777 363 aaKnown RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 RMND1Q9NWS8 449 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 WRAP73Q9P2S5 460 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-203ENST00000467514 DUSP12Q9UNI6 340 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 FRYLO94915 3013 aa12.13□□□□□ -0.47
PRPF3-203ENST00000467514 HBP1O60381 514 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRPF3-203ENST00000467514 LYPLA2O95372 231 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 VTNP04004 478 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CFHP08603 1231 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CYP11B2P19099 503 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 ERCC5P28715 1186 aaPredicted RBP12.12□□□□□ -0.47
PRPF3-203ENST00000467514 SLC26A2P50443 739 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 ARSHQ5FYA8 562 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
PRPF3-203ENST00000467514 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 FAM228AQ86W67 206 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 VPS52Q8N1B4 723 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
PRPF3-203ENST00000467514 RDM1Q8NG50 284 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 TMEM40Q8WWA1 233 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CNTNAP3BQ96NU0 1288 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CASD1Q96PB1 797 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 PCYT2Q99447 389 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CNTNAP3Q9BZ76 1288 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 AKT3Q9Y243 479 aa12.12□□□□□ -0.47
PRPF3-203ENST00000467514 DENND4AQ7Z401 1863 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 FRMD3A2A2Y4 597 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 NT5C1B-RDH14C9J2C7 533 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 CHMP2AO43633 222 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 EPCAMP16422 314 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 GBP2P32456 591 aaPredicted RBP12.11□□□□□ -0.47
PRPF3-203ENST00000467514 CRYBB1P53674 252 aaPredicted RBP12.11□□□□□ -0.47
PRPF3-203ENST00000467514 CYP4A11Q02928 519 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
PRPF3-203ENST00000467514 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 ENOX1Q8TC92 643 aaKnown RBP12.11□□□□□ -0.47
PRPF3-203ENST00000467514 HELQQ8TDG4 1101 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 AUTS2Q8WXX7 1259 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 RUBCNQ92622 972 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 DDX12PQ92771 950 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 GTPBP4Q9BZE4 634 aaKnown RBP12.11□□□□□ -0.47
PRPF3-203ENST00000467514 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 CA14Q9ULX7 337 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
PRPF3-203ENST00000467514 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
PRPF3-203ENST00000467514 COL1A2P08123 1366 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 WDR64B1ANS9 1081 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
PRPF3-203ENST00000467514 SFNP31947 248 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 JAK3P52333 1124 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 ASIC1P78348 528 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 MYL5Q02045 173 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 RNASELQ05823 741 aaKnown RBP12.1□□□□□ -0.47
PRPF3-203ENST00000467514 GIT2Q14161 759 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 CTTNQ14247 550 aaKnown RBP12.1□□□□□ -0.47
PRPF3-203ENST00000467514 ZNF484Q5JVG2 852 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 PPFIBP1Q86W92 1011 aa12.1□□□□□ -0.47
PRPF3-203ENST00000467514 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-203ENST00000467514 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms