RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 OSBPL7Q9BZF2 842 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TMEM117Q9H0C3 514 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TMX1Q9H3N1 280 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 SIX2Q9NPC8 291 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 TOPORSQ9NS56 1045 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 RBAKQ9NYW8 714 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CAPN11Q9UMQ6 739 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 GINS2Q9Y248 185 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 NOC2LQ9Y3T9 749 aaKnown RBP14.13□□□□□ -0.15
COL4A1-202ENST00000467182 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 PTPRJQ12913 1337 aa14.13□□□□□ -0.15
COL4A1-202ENST00000467182 RALGAPA2Q2PPJ7 1873 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 A0A1W2PQJ5 194 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 AKR1B15C9JRZ8 316 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-202ENST00000467182 P4HA2O15460 535 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 ERLIN2O94905 339 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 RPLP2P05387 115 aaKnown RBP14.12□□□□□ -0.15
COL4A1-202ENST00000467182 FECHP22830 423 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 PON1P27169 355 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 MATR3P43243 847 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL4A1-202ENST00000467182 GCLMP48507 274 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 CTCFP49711 727 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-202ENST00000467182 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 RSPH3Q86UC2 560 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 PPFIBP1Q86W92 1011 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 BAP1Q92560 729 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 CCDC127Q96BQ5 260 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 FAM84AQ96KN4 292 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 TCHPQ9BT92 498 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
COL4A1-202ENST00000467182 TRPV6Q9H1D0 765 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 PDE11AQ9HCR9 933 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 PLCB1Q9NQ66 1216 aa14.12□□□□□ -0.15
COL4A1-202ENST00000467182 LRRN2O75325 713 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 SGPL1O95470 568 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 C4BPAP04003 597 aaKnown RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 CTSHP09668 335 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 ACTN1P12814 892 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 SFPQP23246 707 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 AXLP30530 894 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 GTF2H1P32780 548 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 MYL7Q01449 175 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 HSP90AA2PQ14568 343 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 ENOX2Q16206 610 aaKnown RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 PKN2Q16513 984 aaKnown RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 EXOC3L4Q17RC7 722 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 CPLX3Q8WVH0 158 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 TRIM44Q96DX7 344 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 IQCDQ96DY2 449 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 CGRRF1Q99675 332 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 EIF2AQ9BY44 585 aaKnown RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 SEZ6LQ9BYH1 1024 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 EDEM3Q9BZQ6 932 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 MMRN2Q9H8L6 949 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 FAM207AQ9NSI2 230 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 AJAP1Q9UKB5 411 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-202ENST00000467182 COQ4Q9Y3A0 265 aa14.11□□□□□ -0.15
COL4A1-202ENST00000467182 BRCA2P51587 3418 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 STX10O60499 249 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 N4BP1O75113 896 aaKnown RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 CAND2O75155 1236 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 CD4P01730 458 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 STAG3L1P0CL83 205 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 THPOP40225 353 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 MXI1P50539 228 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 POU5F1Q01860 360 aaKnown RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 TMEM132AQ24JP5 1023 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 KLHDC7AQ5VTJ3 777 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 KRT39Q6A163 491 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 SLC27A1Q6PCB7 646 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 TRIM65Q6PJ69 517 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 FAM126BQ8IXS8 530 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 EHBP1Q8NDI1 1231 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 NEK11Q8NG66 645 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 SEMA4DQ92854 862 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 PANX2Q96RD6 677 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 DNAJC7Q99615 494 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 NAA15Q9BXJ9 866 aaKnown RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 INTS2Q9H0H0 1204 aaKnown RBP14.1□□□□□ -0.15
COL4A1-202ENST00000467182 ABHD10Q9NUJ1 306 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 GCNT4Q9P109 453 aa14.1□□□□□ -0.15
COL4A1-202ENST00000467182 M0QZ92 97 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 NPTXRO95502 500 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 CLTAP09496 248 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 CXCL8P10145 99 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 DLATP10515 647 aaKnown RBP14.09□□□□□ -0.15
COL4A1-202ENST00000467182 TRIM21P19474 475 aaKnown RBP14.09□□□□□ -0.15
COL4A1-202ENST00000467182 KRT9P35527 623 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 GRM5P41594 1212 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 OSTNP61366 133 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms