RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SPO11Q9Y5K1 396 aa5.75□□□□□ -1.49
XRN1-206ENST00000467077 ZMYM3Q14202 1370 aa5.75□□□□□ -1.49
XRN1-206ENST00000467077 ORC4O43929 436 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 CD40P25942 277 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 PTGER1P34995 402 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 GPR15P49685 360 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 ESPNLQ6ZVH7 1005 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 RHOT2Q8IXI1 618 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 TMEM132CQ8N3T6 1108 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 ZSWIM2Q8NEG5 633 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 GAB3Q8WWW8 586 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 DDB2Q92466 427 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 AIFM2Q9BRQ8 373 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 IL17RBQ9NRM6 502 aa5.74□□□□□ -1.49
XRN1-206ENST00000467077 A0A1W2PR48 441 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 GPD1P21695 349 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 ATXN7L2Q5T6C5 722 aaPredicted RBP5.73□□□□□ -1.49
XRN1-206ENST00000467077 METRNLQ641Q3 311 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 FDXACB1Q9BRP7 624 aaPredicted RBP5.73□□□□□ -1.49
XRN1-206ENST00000467077 GALNT9Q9HCQ5 603 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 SIRPGQ9P1W8 387 aa5.73□□□□□ -1.49
XRN1-206ENST00000467077 TRIM38O00635 465 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 OPA1O60313 960 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 ITGA10O75578 1167 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 CELA2AP08217 269 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 LTA4HP09960 611 aaKnown RBP5.72□□□□□ -1.49
XRN1-206ENST00000467077 SPATA3Q8NHX4 192 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 MDM1Q8TC05 714 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 HASPINQ8TF76 798 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 FCRL4Q96PJ5 515 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 KLHL11Q9NVR0 708 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
XRN1-206ENST00000467077 MANSC4A6NHS7 340 aaPredicted RBP5.71□□□□□ -1.5
XRN1-206ENST00000467077 DRGXA6NNA5 263 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 UBE3CQ15386 1083 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.5
XRN1-206ENST00000467077 THNSL2Q86YJ6 484 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 FUBP1Q96AE4 644 aaKnown RBP5.71□□□□□ -1.5
XRN1-206ENST00000467077 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 RNPEPQ9H4A4 650 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 NCOA5Q9HCD5 579 aaKnown RBP5.71□□□□□ -1.5
XRN1-206ENST00000467077 CPNE5Q9HCH3 593 aa5.71□□□□□ -1.5
XRN1-206ENST00000467077 KAT6AQ92794 2004 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 PFKMP08237 780 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 ELANEP08246 267 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 CXADRP78310 365 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 MEF2AQ02078 507 aaPredicted RBP5.7□□□□□ -1.5
XRN1-206ENST00000467077 KLHL22Q53GT1 634 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 CRELD2Q6UXH1 353 aaPredicted RBP5.7□□□□□ -1.5
XRN1-206ENST00000467077 FAM43AQ8N2R8 423 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 SARAFQ96BY9 339 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 KCTD5Q9NXV2 234 aa5.7□□□□□ -1.5
XRN1-206ENST00000467077 WIPF3A6NGB9 483 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 ELL2O00472 640 aaPredicted RBP5.69□□□□□ -1.5
XRN1-206ENST00000467077 ASLP04424 464 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 FLT3P36888 993 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 CLRN1P58418 232 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 EXOSC10Q01780 885 aaKnown RBP5.69□□□□□ -1.5
XRN1-206ENST00000467077 PPARAQ07869 468 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 PTCD3Q96EY7 689 aaKnown RBP5.69□□□□□ -1.5
XRN1-206ENST00000467077 CEP95Q96GE4 821 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
XRN1-206ENST00000467077 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 ZSWIM1Q9BR11 485 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
XRN1-206ENST00000467077 A0A1B0GTW7 788 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 PJA2O43164 708 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 PEX1O43933 1283 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 PRKCGP05129 697 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 FLT3LGP49771 235 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 CCT4P50991 539 aaKnown RBP5.68□□□□□ -1.5
XRN1-206ENST00000467077 ZBTB41Q5SVQ8 909 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 PASD1Q8IV76 773 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 TMEM74BQ9NUR3 256 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 OXSMQ9NWU1 459 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 GPRC5DQ9NZD1 345 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 MSRAQ9UJ68 235 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 KCNE5Q9UJ90 142 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 ZKSCAN5Q9Y2L8 839 aa5.68□□□□□ -1.5
XRN1-206ENST00000467077 CBX4O00257 560 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 GASTP01350 101 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
XRN1-206ENST00000467077 RASA3Q14644 834 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
XRN1-206ENST00000467077 MED25Q71SY5 747 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 COLGALT2Q8IYK4 626 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 DEPDC7Q96QD5 511 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 ADGRE3Q9BY15 652 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 ENTPD2Q9Y5L3 495 aa5.67□□□□□ -1.5
XRN1-206ENST00000467077 PLD2O14939 933 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 LRRC32Q14392 662 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 PRAMEF14Q5SWL7 426 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 FOXR2Q6PJQ5 311 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 DPF1Q92782 380 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 TIMP4Q99727 224 aa5.66□□□□□ -1.5
XRN1-206ENST00000467077 MTO1Q9Y2Z2 717 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms