RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 HOXB13Q92826 284 aaPredicted RBP5.5□□□□□ -1.53
EDEM3-205ENST00000466606 CHMP4CQ96CF2 233 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 LSM14BQ9BX40 385 aaKnown RBP5.5□□□□□ -1.53
EDEM3-205ENST00000466606 SLC13A1Q9BZW2 595 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 LIMCH1Q9UPQ0 1083 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 SPEF1Q9Y4P9 236 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 PCDHA13Q9Y5I0 950 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 FANCD2Q9BXW9 1451 aa5.5□□□□□ -1.53
EDEM3-205ENST00000466606 URB2Q14146 1524 aaKnown RBP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 CLASP1Q7Z460 1538 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 TOP2BQ02880 1626 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 ZRANB2O95218 330 aaKnown RBP eCLIP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 GNAT2P19087 354 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 FPR1P21462 350 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 CRHR1P34998 444 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 SCNN1GP51170 649 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 KRTAP10-2P60368 255 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 MGAT2Q10469 447 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 IL10RAQ13651 578 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 PLEKHG6Q3KR16 790 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 MFSD5Q6N075 450 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 RHOT1Q8IXI2 618 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 GSPT2Q8IYD1 628 aaKnown RBP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 ANKRD13AQ8IZ07 590 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 SSH1Q8WYL5 1049 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 ST8SIA2Q92186 375 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 EDAQ92838 391 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 EXTL1Q92935 676 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 CPEB1Q9BZB8 566 aaKnown RBP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 SENP6Q9GZR1 1112 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 BCO1Q9HAY6 547 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 HDAC5Q9UQL6 1122 aa5.49□□□□□ -1.53
EDEM3-205ENST00000466606 MED1Q15648 1581 aaPredicted RBP5.49□□□□□ -1.53
EDEM3-205ENST00000466606 AQRO60306 1485 aaKnown RBP eCLIP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 IFT140Q96RY7 1462 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 CCDC154A6NI56 674 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 PLSCR1O15162 318 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 HTRA2O43464 458 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 MFAP3LO75121 409 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 GASTP01350 101 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 EDNRBP24530 442 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 RECQLP46063 649 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 PTTG1IPP53801 180 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 SLC16A1P53985 500 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 KRT85P78386 507 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 MCL1Q07820 350 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 CRHR2Q13324 411 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 ODR4Q5SWX8 454 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 ANKRD35Q8N283 1001 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 RNF169Q8NCN4 708 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 MDGA1Q8NFP4 955 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 SLC35B2Q8TB61 432 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 KAT5Q92993 513 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 COA7Q96BR5 231 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 MIEF2Q96C03 454 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 GPR20Q99678 358 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 C7orf25Q9BPX7 421 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 SPON1Q9HCB6 807 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 SAP30BPQ9UHR5 308 aaKnown RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 AJAP1Q9UKB5 411 aaPredicted RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 RUVBL1Q9Y265 456 aaKnown RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 THRAP3Q9Y2W1 955 aaKnown RBP5.48□□□□□ -1.53
EDEM3-205ENST00000466606 ACTL7AQ9Y615 435 aa5.48□□□□□ -1.53
EDEM3-205ENST00000466606 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 ENDOD1O94919 500 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 IL33O95760 270 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 AMY1AP04745 511 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 RAP2AP10114 183 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 HSP90B1P14625 803 aaKnown RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 PCSK1P29120 753 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 RABGGTBP53611 331 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 RAP2BP61225 183 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 CSRP2Q16527 193 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 NRN1LQ496H8 165 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 USP39Q53GS9 565 aaKnown RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 C1QL3Q5VWW1 255 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 AFMIDQ63HM1 303 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 PDZD4Q76G19 769 aaPredicted RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 APBB1IPQ7Z5R6 666 aaPredicted RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 SPRED1Q7Z699 444 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 FAM83AQ86UY5 434 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 CMTR2Q8IYT2 770 aaKnown RBP5.47□□□□□ -1.53
EDEM3-205ENST00000466606 CPA6Q8N4T0 437 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 BORCS6Q96GS4 357 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 C1QTNF3Q9BXJ4 246 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 GPR87Q9BY21 358 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 KCNH6Q9H252 994 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 LANCL2Q9NS86 450 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 GIT1Q9Y2X7 761 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 TSC22D4Q9Y3Q8 395 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 IPPQ9Y573 584 aa5.47□□□□□ -1.53
EDEM3-205ENST00000466606 PCF11O94913 1555 aaKnown RBP5.46□□□□□ -1.53
EDEM3-205ENST00000466606 ATRNL1Q5VV63 1379 aa5.46□□□□□ -1.54
EDEM3-205ENST00000466606 FAM171A2A8MVW0 826 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms