RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
PMF1-204ENST00000466489 LRFN2Q9ULH4 789 aa10.9□□□□□ -0.66
PMF1-204ENST00000466489 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
PMF1-204ENST00000466489 LUC7L2Q9Y383 392 aaKnown RBP10.9□□□□□ -0.66
PMF1-204ENST00000466489 TRIOBPQ9H2D6 2365 aa10.9□□□□□ -0.66
PMF1-204ENST00000466489 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 K7ERI5 159 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 MFAP3LO75121 409 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 PNMA6AP0CW24 399 aaPredicted RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 IDEP14735 1019 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 RAB27AP51159 221 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 EPHB4P54760 987 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 ITIH3Q06033 890 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 CUL4BQ13620 913 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 ARID5BQ14865 1188 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 SHHQ15465 462 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 E2F4Q16254 413 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 FKBP15Q5T1M5 1219 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 RSRC2Q7L4I2 434 aaKnown RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 DYMQ7RTS9 669 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 FMNL3Q8IVF7 1028 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 TMEM40Q8WWA1 233 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 DDX12PQ92771 950 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 TRIM6Q9C030 488 aaPredicted RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 AGO3Q9H9G7 860 aaKnown RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 RAB21Q9UL25 225 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
PMF1-204ENST00000466489 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 TTC3P53804 2025 aa10.89□□□□□ -0.67
PMF1-204ENST00000466489 A0A087X0B3 334 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
PMF1-204ENST00000466489 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
PMF1-204ENST00000466489 A0A1W2PQJ5 194 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 K7ENM7 598 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 HOXA2O43364 376 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PRKCBP05771 671 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PRLRP16471 622 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PBX1P40424 430 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 NPTX2P47972 431 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 CLCN6P51797 869 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 WDR5P61964 334 aaKnown RBP10.88□□□□□ -0.67
PMF1-204ENST00000466489 ASIC1P78348 528 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 MBTD1Q05BQ5 628 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PSMD2Q13200 908 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PRPF4BQ13523 1007 aaKnown RBP10.88□□□□□ -0.67
PMF1-204ENST00000466489 ALCAMQ13740 583 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 GIT2Q14161 759 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 SPA17Q15506 151 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 RAB30Q15771 203 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 NAALADL2Q58DX5 795 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 C9orf50Q5SZB4 431 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 WDR93Q6P2C0 686 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 C16orf59Q7L2K0 433 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
PMF1-204ENST00000466489 ADAM2Q99965 735 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 CARD6Q9BX69 1037 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 PCDHB7Q9Y5E2 793 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 FHOD1Q9Y613 1164 aa10.88□□□□□ -0.67
PMF1-204ENST00000466489 GBF1Q92538 1859 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 NPHP3-ACAD11A0A0J9YXS1 232 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 MYMKA6NI61 221 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 RPN1P04843 607 aaKnown RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 MAPTP10636 758 aaKnown RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 AFMP43652 599 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 ZNF131P52739 623 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 MAPK7Q13164 816 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 SMC1AQ14683 1233 aaKnown RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 GPNMBQ14956 572 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 FAM187BQ17R55 369 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 HERC4Q5GLZ8 1057 aaPredicted RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 RASIP1Q5U651 963 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 CC2D1AQ6P1N0 951 aaPredicted RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 LEKR1Q6ZMV7 388 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 SLC24A5Q71RS6 500 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 NPAS4Q8IUM7 802 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 TMEM139Q8IV31 216 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 ABI1Q8IZP0 508 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 BSNDQ8WZ55 320 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 TSC1Q92574 1164 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 PGBD4Q96DM1 585 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms