RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 PCBP1Q15365 356 aaKnown RBP eCLIP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 UGCGQ16739 394 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 AXDND1Q5T1B0 1012 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 C1orf228Q6PIY5 440 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 PRSS55Q6UWB4 352 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 KSR1Q8IVT5 923 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 RDM1Q8NG50 284 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 SLC7A14Q8TBB6 771 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 RUFY2Q8WXA3 655 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 RIT2Q99578 217 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 TTPALQ9BTX7 342 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 TMEM121BQ9BXQ6 578 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 ADAM33Q9BZ11 813 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 ZFP14Q9HCL3 533 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 ZNF334Q9HCZ1 680 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 WASF3Q9UPY6 502 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 IPPQ9Y573 584 aa10.31□□□□□ -0.76
ABCF3-205ENST00000466416 SF3B1O75533 1304 aaKnown RBP eCLIP10.31□□□□□ -0.76
ABCF3-205ENST00000466416 FLNBO75369 2602 aaKnown RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 EPN2O95208 641 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 STBD1O95210 358 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 AXLP30530 894 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RAP1GAPP47736 663 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 NCBP1Q09161 790 aaKnown RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 FOXC1Q12948 553 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 PTGDRQ13258 359 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RAB33AQ14088 237 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 LRRC32Q14392 662 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 GAS6Q14393 721 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 PSMD5Q16401 504 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RNF43Q68DV7 783 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 HEATR6Q6AI08 1181 aaKnown RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 CACNA2D4Q7Z3S7 1137 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 WDR5BQ86VZ2 330 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 MAP4K3Q8IVH8 894 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 LNX1Q8TBB1 728 aaPredicted RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 ING5Q8WYH8 240 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 GATA6Q92908 595 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 MSANTD3Q96H12 275 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 HCFC1R1Q9NWW0 138 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 PCDHGA5Q9Y5G8 931 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 COL4A3BPQ9Y5P4 624 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
ABCF3-205ENST00000466416 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
ABCF3-205ENST00000466416 SETXQ7Z333 2677 aaKnown RBP10.29□□□□□ -0.76
ABCF3-205ENST00000466416 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 ASAP2O43150 1006 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 GAS7O60861 476 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 MICAL2O94851 1124 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 RHOP08100 348 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 SRGAP2CP0DJJ0 459 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 PTPN2P17706 415 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 PSMC3P17980 439 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 NOVA1P51513 510 aaKnown RBP10.29□□□□□ -0.76
ABCF3-205ENST00000466416 NOTUMQ6P988 496 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 SGMS1Q86VZ5 419 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 RAB11FIP4Q86YS3 637 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 EXOC6Q8TAG9 804 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 PRPF31Q8WWY3 499 aaKnown RBP10.29□□□□□ -0.76
ABCF3-205ENST00000466416 LENG9Q96B70 501 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 ZFP42Q96MM3 310 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 TEKT3Q9BXF9 490 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 VPS45Q9NRW7 570 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 SPEGQ15772 3267 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
ABCF3-205ENST00000466416 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ZNF197O14709 1029 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 MSH4O15457 936 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 CHMP2AO43633 222 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ERLIN2O94905 339 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 FCARP24071 287 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 CCNE1P24864 410 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GDI1P31150 447 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 FUT2Q10981 343 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ELAVL2Q12926 359 aaKnown RBP10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GRIK3Q13003 919 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GRM2Q14416 872 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 HSP90AA2PQ14568 343 aaPredicted RBP10.28□□□□□ -0.76
ABCF3-205ENST00000466416 CCDC6Q16204 474 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 LRCH2Q5VUJ6 765 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 DAB2IPQ5VWQ8 1189 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms