RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 DSCC1Q9BVC3 393 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 DDX47Q9H0S4 455 aaKnown RBP10.08□□□□□ -0.8
CDHR3-203ENST00000466045 FGFR1OP2Q9NVK5 253 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 PLK2Q9NYY3 685 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 FAF1Q9UNN5 650 aaPredicted RBP10.08□□□□□ -0.8
CDHR3-203ENST00000466045 NOSIPQ9Y314 301 aaKnown RBP10.08□□□□□ -0.8
CDHR3-203ENST00000466045 UTP11Q9Y3A2 253 aaKnown RBP10.08□□□□□ -0.8
CDHR3-203ENST00000466045 SQORQ9Y6N5 450 aa10.08□□□□□ -0.8
CDHR3-203ENST00000466045 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 HAT1O14929 419 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 RAD51CO43502 376 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 TRMUO75648 421 aaKnown RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 FDPSP14324 419 aaKnown RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 EPHB2P29323 1055 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 HOXD13P35453 343 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 APLP1P51693 650 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 DR1Q01658 176 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 KRT31Q15323 416 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 MCMDC2Q4G0Z9 681 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 VWA3BQ502W6 1294 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 NIPAL1Q6NVV3 410 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 FAM117BQ6P1L5 589 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ARHGEF18Q6ZSZ5 1173 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ZNF589Q86UQ0 364 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ALLCQ8N6M5 410 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 UBLCP1Q8WVY7 318 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PIGBQ92521 554 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 TMEM109Q9BVC6 243 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 NLRC4Q9NPP4 1024 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 DDX18Q9NVP1 670 aaKnown RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PCSK1NQ9UHG2 260 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ZBTB1Q9Y2K1 713 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 MACROD2A1Z1Q3 448 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 CES2O00748 559 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 HGSO14964 777 aaPredicted RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PLSCR1O15162 318 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PFDN6O15212 129 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PTPN4P29074 926 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 UBA7P41226 1012 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 PRKG1Q13976 671 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 TRADDQ15628 312 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 RBM44Q6ZP01 1051 aaKnown RBP10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ECHDC2Q86YB7 292 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ATL1Q8WXF7 558 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 SELENOSQ9BQE4 189 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 SMARCAL1Q9NZC9 954 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 EHD2Q9NZN4 543 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 THEGQ9P2T0 379 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 ANGPTL2Q9UKU9 493 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 DUSP10Q9Y6W6 482 aa10.07□□□□□ -0.8
CDHR3-203ENST00000466045 KCPQ6ZWJ8 1503 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 MYH11P35749 1972 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 PJA2O43164 708 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 T-ENOLP0DO92 83 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 EIF2B2P49770 351 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 FOXO4P98177 505 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 TRIM29Q14134 588 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 TTF1Q15361 905 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 ACSBG2Q5FVE4 666 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 MAP3K21Q5TCX8 1036 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 CCBE1Q6UXH8 406 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 RFPL4BQ6ZWI9 263 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 HCAR2Q8TDS4 363 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 STMN4Q9H169 189 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 TMA7Q9Y2S6 64 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 MYH6P13533 1939 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 ALOX15BO15296 676 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 FOXN1O15353 648 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 PTCD1O75127 700 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 SMIM18P0DKX4 95 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 PIP4K2AP48426 406 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 B2MP61769 119 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 POU5F1Q01860 360 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 DPYSQ14117 519 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 CDONQ4KMG0 1287 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 BTBD8Q5XKL5 378 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 BTNL9Q6UXG8 535 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 DCDC5Q6ZRR9 648 aa10.06□□□□□ -0.8
CDHR3-203ENST00000466045 INTS8Q75QN2 995 aaKnown RBP10.06□□□□□ -0.8
CDHR3-203ENST00000466045 NET1Q7Z628 596 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms