RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DDX6P26196 483 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMC4-205ENST00000465563 DHCR24Q15392 516 aa7.23□□□□□ -1.25
SMC4-205ENST00000465563 FSCN1Q16658 493 aaKnown RBP7.23□□□□□ -1.25
SMC4-205ENST00000465563 MFSD14BQ5SR56 506 aa7.23□□□□□ -1.25
SMC4-205ENST00000465563 FAM102AQ5T9C2 384 aaPredicted RBP7.23□□□□□ -1.25
SMC4-205ENST00000465563 COQ10AQ96MF6 247 aa7.23□□□□□ -1.25
SMC4-205ENST00000465563 USP15Q9Y4E8 981 aaPredicted RBP7.23□□□□□ -1.25
SMC4-205ENST00000465563 PCSK5Q92824 1860 aa7.23□□□□□ -1.25
SMC4-205ENST00000465563 PIPSLA2A3N6 862 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 HKR1P10072 659 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 FLT3LGP49771 235 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 SESN3P58005 492 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 CCDC142Q17RM4 750 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 FAM47AQ5JRC9 791 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 ADGRG3Q86Y34 549 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 CAVIN3Q969G5 261 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 RAX2Q96IS3 184 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 ACAP3Q96P50 834 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 IFT22Q9H7X7 185 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 EPN1Q9Y6I3 576 aaPredicted RBP7.22□□□□□ -1.25
SMC4-205ENST00000465563 FPGT-TNNI3KV9GXZ4 949 aa7.22□□□□□ -1.25
SMC4-205ENST00000465563 UNC119BA6NIH7 251 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 PJA2O43164 708 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 ZEB2O60315 1214 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 ULK1O75385 1050 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 ENPP1P22413 925 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 PTPN7P35236 360 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 BLOC1S1P78537 153 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 MXRA7P84157 204 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMC4-205ENST00000465563 ABHD17BQ5VST6 288 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 METRNLQ641Q3 311 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 HDGFL2Q7Z4V5 671 aaPredicted RBP7.21□□□□□ -1.26
SMC4-205ENST00000465563 NPM2Q86SE8 214 aaKnown RBP7.21□□□□□ -1.26
SMC4-205ENST00000465563 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 ZNF764Q96H86 408 aaPredicted RBP7.21□□□□□ -1.26
SMC4-205ENST00000465563 TTC1Q99614 292 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 DPP7Q9UHL4 492 aa7.21□□□□□ -1.26
SMC4-205ENST00000465563 NEMP1O14524 444 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 ADCY6O43306 1168 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 AKR1B10O60218 316 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 CHN2P52757 468 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 CLRN1P58418 232 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 RESTQ13127 1097 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 MST1LQ2TV78 715 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 ATXN7L2Q5T6C5 722 aaPredicted RBP7.2□□□□□ -1.26
SMC4-205ENST00000465563 ARMC6Q6NXE6 501 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 CLRN3Q8NCR9 226 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 SLC35B2Q8TB61 432 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 ADAM2Q99965 735 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 ATP11BQ9Y2G3 1177 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 MAP3K2Q9Y2U5 619 aa7.2□□□□□ -1.26
SMC4-205ENST00000465563 DRGXA6NNA5 263 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 MARCH11A6NNE9 402 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 SNRPA1P09661 255 aaKnown RBP7.19□□□□□ -1.26
SMC4-205ENST00000465563 SEC24CP53992 1094 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 MRPS21P82921 87 aaKnown RBP7.19□□□□□ -1.26
SMC4-205ENST00000465563 CDK17Q00537 523 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 TP53BP2Q13625 1128 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 ERCC6LQ2NKX8 1250 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 TAF7LQ5H9L4 462 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 DDX46Q7L014 1031 aaKnown RBP7.19□□□□□ -1.26
SMC4-205ENST00000465563 RIN2Q8WYP3 895 aaPredicted RBP7.19□□□□□ -1.26
SMC4-205ENST00000465563 PHACTR3Q96KR7 559 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 BBC3Q96PG8 261 aaPredicted RBP7.19□□□□□ -1.26
SMC4-205ENST00000465563 NEU1Q99519 415 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
SMC4-205ENST00000465563 CXorf49A8MYA2 514 aaPredicted RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 ENPP3O14638 875 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 SPDEFO95238 335 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 ADSLP30566 484 aaPredicted RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 ID4P47928 161 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 CLK3P49761 638 aaKnown RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 GJC2Q5T442 439 aaPredicted RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 AGAP9Q5VTM2 703 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 FAM180AQ6UWF9 173 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 ZNF572Q7Z3I7 529 aaPredicted RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 TRMT2AQ8IZ69 625 aaKnown RBP7.18□□□□□ -1.26
SMC4-205ENST00000465563 REPS2Q8NFH8 660 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 GPR156Q8NFN8 814 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 OR7D4Q8NG98 312 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 BCO1Q9HAY6 547 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
SMC4-205ENST00000465563 MASP2O00187 686 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 CFIP05156 583 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 MRPS9P82933 396 aaKnown RBP7.17□□□□□ -1.26
SMC4-205ENST00000465563 FOXI1Q12951 378 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 RRP12Q5JTH9 1297 aaKnown RBP7.17□□□□□ -1.26
SMC4-205ENST00000465563 RHOT2Q8IXI1 618 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 ASB10Q8WXI3 467 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 APOBEC2Q9Y235 224 aaKnown RBP7.17□□□□□ -1.26
SMC4-205ENST00000465563 INSL6Q9Y581 213 aa7.17□□□□□ -1.26
SMC4-205ENST00000465563 CDKL5O76039 1030 aa7.16□□□□□ -1.26
SMC4-205ENST00000465563 FOSP01100 380 aaPredicted RBP7.16□□□□□ -1.26
SMC4-205ENST00000465563 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
SMC4-205ENST00000465563 TYRP1P17643 537 aa7.16□□□□□ -1.26
SMC4-205ENST00000465563 ECHS1P30084 290 aa7.16□□□□□ -1.26
SMC4-205ENST00000465563 GYS2P54840 703 aa7.16□□□□□ -1.26
SMC4-205ENST00000465563 STRN3Q13033 797 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms