RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CEP170P1Q96L14 293 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 PLVAPQ9BX97 442 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 MYOZ2Q9NPC6 264 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 CNOT8Q9UFF9 292 aaKnown RBP19.67■□□□□ 0.74
SYNE4-204ENST00000465425 PCDHA3Q9Y5H8 950 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 PCDHA10Q9Y5I2 948 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 RWDD2BP57060 319 aa19.66■□□□□ 0.74
SYNE4-204ENST00000465425 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
SYNE4-204ENST00000465425 YTHDF3Q7Z739 585 aaKnown RBP19.66■□□□□ 0.74
SYNE4-204ENST00000465425 SLC13A5Q86YT5 568 aaPredicted RBP19.66■□□□□ 0.74
SYNE4-204ENST00000465425 C3orf20Q8ND61 904 aa19.66■□□□□ 0.74
SYNE4-204ENST00000465425 TMC2Q8TDI7 906 aa19.66■□□□□ 0.74
SYNE4-204ENST00000465425 MOV10L1Q9BXT6 1211 aaKnown RBP19.66■□□□□ 0.74
SYNE4-204ENST00000465425 TOPORSQ9NS56 1045 aaPredicted RBP19.66■□□□□ 0.74
SYNE4-204ENST00000465425 GRHL1Q9NZI5 618 aa19.66■□□□□ 0.74
SYNE4-204ENST00000465425 PTPN22Q9Y2R2 807 aa19.66■□□□□ 0.74
SYNE4-204ENST00000465425 HNRNPDLO14979 420 aaKnown RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 CAND2O75155 1236 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 SHBGP04278 402 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 KRT5P13647 590 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 RPL21P46778 160 aaKnown RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 MTMR2Q13614 643 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 RNF187Q5TA31 235 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 TTC27Q6P3X3 843 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 RDM1Q8NG50 284 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 ZBED3Q96IU2 234 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 C17orf75Q9HAS0 396 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 GTF2H1P32780 548 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 CXCL9Q07325 125 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 TNFAIP1Q13829 316 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 BYSLQ13895 437 aaKnown RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 VPS33BQ9H267 617 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 RPAP3Q9H6T3 665 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-204ENST00000465425 GGA2Q9UJY4 613 aa19.65■□□□□ 0.74
SYNE4-204ENST00000465425 H0YHG0 523 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 PAEPP09466 180 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 CCND2P30279 289 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 COILP38432 576 aaPredicted RBP19.64■□□□□ 0.74
SYNE4-204ENST00000465425 MCCD1P59942 119 aaPredicted RBP19.64■□□□□ 0.74
SYNE4-204ENST00000465425 CYP24A1Q07973 514 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 SV2AQ7L0J3 742 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 ZDHHC14Q8IZN3 488 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 SPIRE2Q8WWL2 714 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 ATP6V0A1Q93050 837 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 TLCD1Q96CP7 247 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 BICD1Q96G01 975 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 MFSD14AQ96MC6 490 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 EPB41L4BQ9H329 900 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 LRRC4CQ9HCJ2 640 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 GABBR1Q9UBS5 961 aa19.64■□□□□ 0.74
SYNE4-204ENST00000465425 PASKQ96RG2 1323 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 TLDC2A0PJX2 215 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 IFT88Q13099 833 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 SLC29A2Q14542 456 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 CYP1B1Q16678 543 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 ACAD10Q6JQN1 1059 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 ARMC9Q7Z3E5 817 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 BSNDQ8WZ55 320 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 DHX38Q92620 1227 aaKnown RBP19.64■□□□□ 0.73
SYNE4-204ENST00000465425 FBXL18Q96ME1 805 aa19.64■□□□□ 0.73
SYNE4-204ENST00000465425 TCRBV7S2A1N4TA0A589 114 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 CTNND1O60716 968 aaKnown RBP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 DKC1O60832 514 aaKnown RBP eCLIP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 FNTAP49354 379 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 SOX10P56693 466 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 SLMAPQ14BN4 828 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 XRRA1Q6P2D8 792 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 GPD1LQ8N335 351 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 RAPGEF5Q92565 580 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 NTPCRQ9BSD7 190 aaKnown RBP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 CAPN7Q9Y6W3 813 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 RGS16O15492 202 aaPredicted RBP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 ECEL1O95672 775 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 CALCOCO2Q13137 446 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 BAATQ14032 418 aaPredicted RBP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 PPP1R7Q15435 360 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 SLC39A4Q6P5W5 647 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 ENOSF1Q7L5Y1 443 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 CROCCP2Q86T23 111 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 CPNE8Q86YQ8 564 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 RNF25Q96BH1 459 aaPredicted RBP19.63■□□□□ 0.73
SYNE4-204ENST00000465425 GPRASP2Q96D09 838 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 PGM2Q96G03 612 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 EFCC1Q9HA90 598 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 RNF146Q9NTX7 359 aa19.63■□□□□ 0.73
SYNE4-204ENST00000465425 SMIM23A6NLE4 172 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 VWA5AO00534 786 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 FDX1P10109 184 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 RARAP10276 462 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 MAPK4P31152 587 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CYFIP1Q7L576 1253 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 DDX1Q92499 740 aaKnown RBP19.62■□□□□ 0.73
SYNE4-204ENST00000465425 TATDN2Q93075 761 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 ELMO3Q96BJ8 720 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 FAM213AQ9BRX8 229 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 SEMA4AQ9H3S1 761 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 C1orf112Q9NSG2 853 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 GINM1Q9NU53 330 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CNOT7Q9UIV1 285 aaKnown RBP19.62■□□□□ 0.73
SYNE4-204ENST00000465425 ANAPC7Q9UJX3 599 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms