RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 BRAPQ7Z569 592 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 RIPOR3Q96MK2 946 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 TIPINQ9BVW5 301 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 SFXN1Q9H9B4 322 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 KMT5AQ9NQR1 393 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 TSHZ2Q9NRE2 1034 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 ARHGAP28Q9P2N2 729 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 ADAM28Q9UKQ2 775 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 GDAQ9Y2T3 454 aa28.46■■■□□ 2.15
U2AF1-206ENST00000464750 CASTOR2A6NHX0 329 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 ADH1AP07327 375 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 GUCY2CP25092 1073 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 DSG1Q02413 1049 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 HSP90AA2PQ14568 343 aaPredicted RBP28.45■■■□□ 2.14
U2AF1-206ENST00000464750 KIAA0319Q5VV43 1072 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 KCTD17Q8N5Z5 321 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 PAAF1Q9BRP4 392 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 GPR62Q9BZJ7 368 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 CXCL16Q9H2A7 254 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 TNFSF13BQ9Y275 285 aa28.45■■■□□ 2.14
U2AF1-206ENST00000464750 VPS37CA5D8V6 355 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-206ENST00000464750 TEX28O15482 410 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 THP07101 528 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 TMEM119Q4V9L6 283 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 TMC5Q6UXY8 1006 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 APBB1IPQ7Z5R6 666 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-206ENST00000464750 EDAQ92838 391 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 B3GALT6Q96L58 329 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 TMEM134Q9H6X4 195 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 C17orf75Q9HAS0 396 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 NR2E1Q9Y466 385 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 TRIOO75962 3097 aa28.44■■■□□ 2.14
U2AF1-206ENST00000464750 RAD51AP2Q09MP3 1159 aa28.43■■■□□ 2.14
U2AF1-206ENST00000464750 TAS1R3Q7RTX0 852 aa28.43■■■□□ 2.14
U2AF1-206ENST00000464750 SYT2Q8N9I0 419 aaPredicted RBP28.43■■■□□ 2.14
U2AF1-206ENST00000464750 AK8Q96MA6 479 aa28.43■■■□□ 2.14
U2AF1-206ENST00000464750 MRPL4Q9BYD3 311 aaKnown RBP28.43■■■□□ 2.14
U2AF1-206ENST00000464750 RXFP1Q9HBX9 757 aa28.43■■■□□ 2.14
U2AF1-206ENST00000464750 CHST7Q9NS84 486 aa28.43■■■□□ 2.14
U2AF1-206ENST00000464750 DAXXQ9UER7 740 aaPredicted RBP28.43■■■□□ 2.14
U2AF1-206ENST00000464750 SF3B1O75533 1304 aaKnown RBP eCLIP28.43■■■□□ 2.146e-6■■■■■ 103.4
U2AF1-206ENST00000464750 CITO14578 2027 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 MTCL1Q9Y4B5 1905 aaKnown RBP28.42■■■□□ 2.14
U2AF1-206ENST00000464750 SFI1A8K8P3 1242 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 TADA2AO75478 443 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 BMP15O95972 392 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 PLA2G4BP0C869 781 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 SLC12A3P55017 1021 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 NAB2Q15742 525 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 USP41Q3LFD5 358 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 ZNF568Q3ZCX4 644 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 ATAT1Q5SQI0 421 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 FEZF2Q8TBJ5 459 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 HASPINQ8TF76 798 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 ACO2Q99798 780 aaKnown RBP28.42■■■□□ 2.14
U2AF1-206ENST00000464750 BACH2Q9BYV9 841 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 CDT1Q9H211 546 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 MAN1C1Q9NR34 630 aa28.42■■■□□ 2.14
U2AF1-206ENST00000464750 RBM19Q9Y4C8 960 aaKnown RBP28.42■■■□□ 2.14
U2AF1-206ENST00000464750 SLC16A4O15374 487 aa28.41■■■□□ 2.14
U2AF1-206ENST00000464750 KIF4AO95239 1232 aa28.41■■■□□ 2.14
U2AF1-206ENST00000464750 CEP120Q8N960 986 aa28.41■■■□□ 2.14
U2AF1-206ENST00000464750 TARS2Q9BW92 718 aaKnown RBP28.41■■■□□ 2.14
U2AF1-206ENST00000464750 VWA8A3KMH1 1905 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 C2CD4DB7Z1M9 353 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 GLUD1P00367 558 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 PDCP20941 246 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 ZXDAP98168 799 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 GLRA4Q5JXX5 417 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 GPR149Q86SP6 731 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 RIN2Q8WYP3 895 aaPredicted RBP28.4■■■□□ 2.14
U2AF1-206ENST00000464750 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.4■■■□□ 2.14
U2AF1-206ENST00000464750 KCND2Q9NZV8 630 aa28.4■■■□□ 2.14
U2AF1-206ENST00000464750 SLC26A4O43511 780 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 PLS3P13797 630 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 UBA7P41226 1012 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 GRM5P41594 1212 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 SF3A1Q15459 793 aaKnown RBP28.39■■■□□ 2.14
U2AF1-206ENST00000464750 PTPN21Q16825 1174 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 HFE2Q6ZVN8 426 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 GPR65Q8IYL9 337 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 SPIRE2Q8WWL2 714 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 CALML4Q96GE6 196 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 CCDC94Q9BW85 323 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-206ENST00000464750 PTPRHQ9HD43 1115 aa28.39■■■□□ 2.14
U2AF1-206ENST00000464750 MYO10Q9HD67 2058 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 CACNB1Q02641 598 aaPredicted RBP28.38■■■□□ 2.13
U2AF1-206ENST00000464750 GRIN1Q05586 938 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 RTP2Q5QGT7 225 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 ELMSAN1Q6PJG2 1045 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 TRIM67Q6ZTA4 783 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 ZBTB33Q86T24 672 aa28.38■■■□□ 2.13
U2AF1-206ENST00000464750 TDRD5Q8NAT2 981 aaKnown RBP28.38■■■□□ 2.13
U2AF1-206ENST00000464750 PPP1R10Q96QC0 940 aaKnown RBP28.38■■■□□ 2.13
U2AF1-206ENST00000464750 NPHP3-ACAD11A0A0J9YXS1 232 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 LONP1P36776 959 aaKnown RBP28.37■■■□□ 2.13
U2AF1-206ENST00000464750 SMTNP53814 917 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 YARSP54577 528 aaKnown RBP28.37■■■□□ 2.13
U2AF1-206ENST00000464750 OSTNP61366 133 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 CREMQ03060 361 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms