RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 STKLD1Q8NE28 680 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 RPGRQ92834 1020 aaKnown RBP12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 MIS12Q9H081 205 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 KCTD10Q9H3F6 313 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 NMRK1Q9NWW6 199 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 ARPP21Q9UBL0 812 aaPredicted RBP12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 ADGRA3Q8IWK6 1321 aa12.32□□□□□ -0.44
TNRC6A-205ENST00000464539 CYP2D7A0A087X1C5 515 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ESYT2A0FGR8 921 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 TJP3O95049 919 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SLC9A1P19634 815 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 TXKP42681 527 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 CAV1Q03135 178 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 NR1H3Q13133 447 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PABPC1LQ4VXU2 614 aaKnown RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 RGMBQ6NW40 437 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF398Q8TD17 642 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SLCO2A1Q92959 643 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 DENND2DQ9H6A0 471 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 UBN1Q9NPG3 1134 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 HAO1Q9UJM8 370 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PCDHA2Q9Y5H9 948 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 GMEB1Q9Y692 573 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PFASO15067 1338 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SMIM22K7EJ46 135 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 MAP3K13O43283 966 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 NMT2O60551 498 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ATP9AO75110 1047 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 UPP2O95045 317 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZWINTO95229 277 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ITIH2P19823 946 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 GSTT1P30711 240 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 HOXA10P31260 410 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SLC34A1Q06495 639 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 AP1B1Q10567 949 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 RCN2Q14257 317 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 LONRF1Q17RB8 773 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SLC45A4Q5BKX6 768 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 FAM47AQ5JRC9 791 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 HYIQ5T013 277 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SNX30Q5VWJ9 437 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 C11orf63Q6NUN7 778 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 SYDE1Q6ZW31 735 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF212Q9UDV6 495 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNRF3Q9ULT6 936 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 CHKBQ9Y259 395 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 COMMD3-BMI1R4GMX3 469 aa12.31□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 FAM155AB1AL88 458 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 hCG_1984214I3L0E3 225 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 TRPA1O75762 1119 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 TTC4O95801 387 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 ACTN1P12814 892 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 COILP38432 576 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 NAPAP54920 295 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 CXCL9Q07325 125 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 MOGSQ13724 837 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 GIT2Q14161 759 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 EPHA7Q15375 998 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 PTPROQ16827 1216 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF713Q8N859 430 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 C12orf50Q8NA57 414 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 UHMK1Q8TAS1 419 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 GDAP1Q8TB36 358 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 TBCKQ8TEA7 893 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 SCG3Q8WXD2 468 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 C18orf8Q96DM3 657 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 NDNQ99608 321 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms