RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TNFAIP8L3Q5GJ75 292 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SUSD4Q5VX71 490 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 CDCA2Q69YH5 1023 aaPredicted RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 MIS18BP1Q6P0N0 1132 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 CLEC4GQ6UXB4 293 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ZNF571Q7Z3V5 609 aaPredicted RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ADGRA1Q86SQ6 560 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ARHGAP24Q8N264 748 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SVOPQ8N4V2 548 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 NEDD1Q8NHV4 660 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 RASGRP4Q8TDF6 673 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 U2AF1L4Q8WU68 220 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PIGBQ92521 554 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SLCO2A1Q92959 643 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 DNAJC19Q96DA6 116 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 NAF1Q96HR8 494 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PRMT1Q99873 361 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TMEM47Q9BQJ4 181 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ETAA1Q9NY74 926 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SLC5A4Q9NY91 659 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 STOML1Q9UBI4 398 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 DDX25Q9UHL0 483 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PCDHA12Q9UN75 941 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CYP2D7A0A087X1C5 515 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ANKRD33BA6NCL7 494 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 EIF3DO15371 548 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 RIPK2O43353 540 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 UBOX5O94941 541 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 UNC5CO95185 931 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ZWINTO95229 277 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ECEL1O95672 775 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 F11P03951 625 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 RARAP10276 462 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 SKIP12755 728 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ACADSP16219 412 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CALB2P22676 271 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CTNNA2P26232 953 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PON1P27169 355 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PSMC2P35998 433 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 GSK3AP49840 483 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ALDH5A1P51649 535 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 GALCP54803 685 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 MXRA7P84157 204 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ROR2Q01974 943 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 KLC1Q07866 573 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PRPF4BQ13523 1007 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PLS1Q14651 629 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 STAT4Q14765 748 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CYP1B1Q16678 543 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ANKRD20A2Q5SQ80 823 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ANKRD20A1Q5TYW2 823 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ANKRD20A3Q5VUR7 823 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 NUGGCQ68CJ6 796 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 NAIF1Q69YI7 327 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PPP1R2P3Q6NXS1 205 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 LYPD4Q6UWN0 246 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 TMC4Q7Z404 712 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 SDCCAG8Q86SQ7 713 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 GPBP1Q86WP2 473 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 DDX42Q86XP3 938 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PPFIBP2Q8ND30 876 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 SMC1BQ8NDV3 1235 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ZNF398Q8TD17 642 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 AGAP11Q8TF27 550 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 ZNF483Q8TF39 744 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CKAP2Q8WWK9 683 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 THOC1Q96FV9 657 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 BICD1Q96G01 975 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 TRAPPC9Q96Q05 1148 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 OSBPL1AQ9BXW6 950 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 NYXQ9GZU5 481 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 FAM192AQ9GZU8 254 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CCDC113Q9H0I3 377 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 LRMDAQ9H2I8 198 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 KCTD10Q9H3F6 313 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 RIOX1Q9H6W3 641 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 CCDC87Q9NVE4 849 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 SEL1LQ9UBV2 794 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PACSIN2Q9UNF0 486 aaPredicted RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 STX8Q9UNK0 236 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 SMG5Q9UPR3 1016 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 DNM3Q9UQ16 869 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 LRRC42Q9Y546 428 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 USH1CQ9Y6N9 552 aa7.7□□□□□ -1.18
CLSTN1-204ENST00000464286 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 A6NHS1 94 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 TCP11X1B4DZS4 312 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 P4HA2O15460 535 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 NMT2O60551 498 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 CDH16O75309 829 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 MTA2O94776 668 aa7.69□□□□□ -1.18
CLSTN1-204ENST00000464286 NTSR2O95665 410 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms