RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CSRP2Q16527 193 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 FAM47AQ5JRC9 791 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 PRAMEF14Q5SWL7 426 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 GJC2Q5T442 439 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-208ENST00000464001 BTNL9Q6UXG8 535 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 RNF180Q86T96 592 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 BEND2Q8NDZ0 799 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 RIOX1Q9H6W3 641 aa5.83□□□□□ -1.48
ITGB1-208ENST00000464001 TTBK1Q5TCY1 1321 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-208ENST00000464001 ZNF185O15231 689 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 PJA2O43164 708 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 AKR1B10O60218 316 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 PTPN7P35236 360 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 ID4P47928 161 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 CDK17Q00537 523 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 GUCY1B3Q02153 619 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 STRN3Q13033 797 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 PDCD4Q53EL6 469 aaKnown RBP5.82□□□□□ -1.48
ITGB1-208ENST00000464001 MFSD14BQ5SR56 506 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 Q6YL49 198 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 RNF169Q8NCN4 708 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 CPEB3Q8NE35 698 aaKnown RBP5.82□□□□□ -1.48
ITGB1-208ENST00000464001 GPR156Q8NFN8 814 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 SLKQ9H2G2 1235 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-208ENST00000464001 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 EDARQ9UNE0 448 aa5.82□□□□□ -1.48
ITGB1-208ENST00000464001 BRINP1O60477 761 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 SNRPA1P09661 255 aaKnown RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 MTHFD2P13995 350 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 DDX6P26196 483 aaKnown RBP eCLIP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 ADSLP30566 484 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 SOX5P35711 763 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 CLRN1P58418 232 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 MRPS9P82933 396 aaKnown RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 MST1LQ2TV78 715 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 ATXN7L2Q5T6C5 722 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 FAM102AQ5T9C2 384 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 THNSL2Q86YJ6 484 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 AUTS2Q8WXX7 1259 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 RIN2Q8WYP3 895 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 FATE1Q969F0 183 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 COQ10AQ96MF6 247 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 TEX101Q9BY14 249 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 BCO1Q9HAY6 547 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 ATP11BQ9Y2G3 1177 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 TBX22Q9Y458 520 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 USP15Q9Y4E8 981 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-208ENST00000464001 FPGT-TNNI3KV9GXZ4 949 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 PCSK5Q92824 1860 aa5.81□□□□□ -1.48
ITGB1-208ENST00000464001 PIPSLA2A3N6 862 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 DRGXA6NNA5 263 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 ZAR1LA6NP61 321 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 GOLGA8AA7E2F4 631 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 HKR1P10072 659 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 STRIP1Q5VSL9 837 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 ARMC6Q6NXE6 501 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 OLFML1Q6UWY5 402 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 ZNF572Q7Z3I7 529 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-208ENST00000464001 CMTR2Q8IYT2 770 aaKnown RBP5.8□□□□□ -1.48
ITGB1-208ENST00000464001 OR7D4Q8NG98 312 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 CAVIN3Q969G5 261 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 CAAP1Q9H8G2 361 aa5.8□□□□□ -1.48
ITGB1-208ENST00000464001 CXorf49A8MYA2 514 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 ADCY6O43306 1168 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 EIF5BO60841 1220 aaKnown RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 TGM1P22735 817 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 ECHS1P30084 290 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 BLOC1S1P78537 153 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 FAPQ12884 760 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 RRP12Q5JTH9 1297 aaKnown RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 ABHD17BQ5VST6 288 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 METRNLQ641Q3 311 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 STRA8Q7Z7C7 330 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 TRMT2AQ8IZ69 625 aaKnown RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 UBR7Q8N806 425 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 SLC35B2Q8TB61 432 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 PHACTR3Q96KR7 559 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 UHRF1Q96T88 793 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 REXO4Q9GZR2 422 aaKnown RBP5.79□□□□□ -1.48
ITGB1-208ENST00000464001 SYBUQ9NX95 663 aa5.79□□□□□ -1.48
ITGB1-208ENST00000464001 POLR2AP24928 1970 aaKnown RBP5.78□□□□□ -1.48
ITGB1-208ENST00000464001 UNC119BA6NIH7 251 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 CHN2P52757 468 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 PER3P56645 1201 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 CCT2P78371 535 aaKnown RBP5.78□□□□□ -1.48
ITGB1-208ENST00000464001 RESTQ13127 1097 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 SP140Q13342 867 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 ADRM1Q16186 407 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 MUM1Q2TAK8 710 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 SPDYE7PQ495Y7 208 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 MUM1L1Q5H9M0 696 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 CHAC2Q8WUX2 184 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 LMBR1Q8WVP7 490 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 QRSL1Q9H0R6 528 aaKnown RBP5.78□□□□□ -1.48
ITGB1-208ENST00000464001 GREM2Q9H772 168 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 IFT122Q9HBG6 1241 aa5.78□□□□□ -1.48
ITGB1-208ENST00000464001 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms